Gene Information

Name : ECSP_1316 (ECSP_1316)
Accession : YP_003077236.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1385542 - 1385967 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence : 
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAACTATTCGAATGAATTCAAACTTCGTATGGTGGAACTGGCATC
ACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTCCTGTTCAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCGTATATCACGGCGTCTTCAGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAA
ATAACGCCGGATGAGCAGAAAGAACCGGTGGCGGCCATTGCGCCGTCTTTATCCACTTCCACTCAGACCAGTGTCAGTGC
CGGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCATCGCCAGAGCTGCTCACGCTGTTGATCC
GTGAACTGACCGGGAGGGGACGATGA

Protein sequence : 
MELQDWRKEPRKNYSNEFKLRMVELASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLQVTTSSDTGVELLPVE
ITPDEQKEPVAAIAPSLSTSTQTSVSAGSCKVEFRHGNMTLENPSPELLTLLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 2e-61 100
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 1e-60 99
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 8e-57 90
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 8e-51 85
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 8e-51 85
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 3e-43 83
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 4e-48 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 1e-32 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_1316 YP_003077236.1 hypothetical protein VFG1672 Protein 1e-43 83
ECSP_1316 YP_003077236.1 hypothetical protein VFG1666 Protein 2e-48 79
ECSP_1316 YP_003077236.1 hypothetical protein VFG1738 Protein 3e-33 54