Gene Information

Name : ECSP_1300 (ECSP_1300)
Accession : YP_003077221.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1373424 - 1373933 bp
Length : 510 bp
Strand : +
Note : -

DNA sequence : 
GTGCAAATAACCGAAGCCTTAATTTCAGAGCCGGGGGAAATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGCCAAA
TCTGTTGGCATTTCACTTCACGCTCTATTCGGCAGAAGGAATCTATGGTCAACAGATTCAGACATTTTGTAGTTCCTTTC
ACCGACGGGTACACGAACGTATTACGGAGCATAATCACACGGTCAGCCCATCAGCGCCGGTGGTATTACGCTGGTTGCGG
GAACAACATGAAGGAGCACAGATACGATGTCTGTTGCTGCTCAGCCAGACGAGTATTTGCCATCCGCGAGTCGGCGTCAT
GGCTGATGAAGAATGTGCGCAACTGGTGGATTTACTGCAACAGACCTGGTCGGTGATAAGTGCTGGCGGACAATGCCGGG
TGGAAAGATGTTTTCGGGTGGCCCGGCCTGGTTCATCAGGGCAATACGTGGCGTTAAAAACGGCTGTTCAGTCCTTTATG
TCGCAGGTTATTGCAACAATCATCCGGTGA

Protein sequence : 
MQITEALISEPGEIRRFVQQAVDHWPNLLAFHFTLYSAEGIYGQQIQTFCSSFHRRVHERITEHNHTVSPSAPVVLRWLR
EQHEGAQIRCLLLLSQTSICHPRVGVMADEECAQLVDLLQQTWSVISAGGQCRVERCFRVARPGSSGQYVALKTAVQSFM
SQVIATIIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 2e-76 100
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 2e-76 100
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 4e-52 75
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 3e-51 74
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 3e-59 73
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 3e-46 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_1300 YP_003077221.1 hypothetical protein VFG1638 Protein 2e-52 75
ECSP_1300 YP_003077221.1 hypothetical protein VFG1578 Protein 1e-59 73