Gene Information

Name : ECSP_1236 (ECSP_1236)
Accession : YP_003077159.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 1322683 - 1325043 bp
Length : 2361 bp
Strand : +
Note : -

DNA sequence :
ATGGTTCATAAATCTGACAGTGATGAATTAGCTGCATTGAGGGCAGAAAATGCCCGTCTGGTCTCATTACTTGAAGCTCA
TGGGATTGAATGGCGACGTAAACCGCAGACTCCTGTGCAGCGCGTTTCTGTATTATCCACCGACGAGAAGGTTGCATTAT
TTCGTCGGTTGTTTCGTGGGCGTGATGATGTATGGGCACTTAGATGGGAAAGTAAAACCAGCGGCAAATCAGGGTACTCT
CCTGCCTGCGCTAACGAATGGCAGGCGAGAATATGCGGTAAACCCCGGATAAAATGTGGGGACTGCGCTCACCGTCAGTT
GATTCCTGTATCCGATCTCGTCATCTACCACCATCTGGCCGGTACCCATACTGTCGGGATGTATCCGTTGCTGGAAGATG
ATTCCTGTTATTTTCTGGCAGTTGATTTTGATGAAGCTGAATGGCAGAAGGATGCATCCGCATTCATGCGATCCTGTGAT
GAGCTGGGTGTACCTGCTGCGCTGGAAATATCCCGTTCACGTCAGGGGGCGCATGTCTGGATATTTTTTGCCTCACGAGT
TTCGGCCCGCGAAGCTCGCCGTCTGGGGACTGCTATTATTAGCTATACGTGTAGTCGGACCCGACAGCTGCGATTGGGGT
CTTATGACCGATTATTTCCTAATCAGGATACTATGCCAAAAGGGGGATTTGGTAATCTCATAGCGTTACCTCTGCAAAAA
AGACCGCGTGAATTGGGGGGAAGCGTTTTTGTTGATATGAATCTCCAGCCTTATCCTGATCAGTGGGCTTTTCTTGTATC
GGTGACCCCGATGAATGTGCAGGATATTGAACCGACGATATTACGGGCTACAGGGAGTATCCATCCTCTGGATGTGAATT
TTATCAACGAAGAAGACCTGGGTACGCCGTGGGAAGAGAAAAAATCATCAGGAAACAGACTGAATATTTCTATTGCAGAA
CCGCTGAAAATCACGCTGGCAAACCAGATCTATTTCGAAAAAGCGCAATTACCTCAGGTGCTGATTAACCGACTTATTCG
GCTGGCAGCATTTCCGAACCCTGAGTTTTATAAGGCTCAGGCAATGCGTATGTCAGTCTGGAATAAGCCCCGTGTTATAG
GTTGTGCGGAGAATTACCCGCAACACATTGCGTTGCCCCGGGGATGTCTGGACAGCGTATTATCTTTCCTTAGGGACAAC
AATATTGCTGCAGAATTAATCGATAAACGATTTGCCGGGACGGAATGTAATGCCGTTTTTATGGGAAACCTCAGAGCGGA
GCAGGAAGAGGCCGTTTCGGCATTACTCCGTTATGACACTGGTGTGCTTTGTGCGCCAACGGCTTTTGGTAAGACAGTTA
CCGCAGCGGCAGTGATTGCCAAGCGGAAAGTGAATACACTGATACTGGTACACCGGACTGAATTGCTGAAGCAGTGGCAG
GAGCGTCTCGCGGTGTTTCTGCAGGCCGGTGACAGTATTGGTATTATCGGGGGAGGTAAACATAAACCCTGTGGCAATAT
TGATATTGCGGTGGTGCAGTCCATATCCAGACAAGGAGAAGTTGAACCTCTGGTCAGGAATTATGGGCAAATCATTGTGG
ATGAGTGCCATCATATTGGCGCGGTTTCATTTTCTGCGATTCTGAAGGAAACGAATGCCAGATATCTGCTTGGCCTGACG
GCAACACCAATCCGACGGGATGGTCTGCATCCCATTATTTTTATGTACTGTGGTGCCATTCGCCATACAGCGGTCCGCCC
GAAGGAAAGCCCACATAATCTGGAGGTACTGATCCGTTCCCGTTTTACATCTGGTCATTTACCATCGGATGCGAGAATCC
AGGATATTTTCAGAGAAATTGCTCTGGATCATGACAGAACGGTGGCGATAGCTGAAGAAGCCATGAAAGCTTTCGGGCAG
GGGCGAAAAGTTCTGGTACTGACTGAACGTACAGATCATCTGGATGAGATAGCATCAGTGATGAATTCACTGAAATTGTC
TCCCTTTATTCTCCATGGTCGACTATCGAAAAAAAAGCGTGCGATGCTGATATCCGGGCTGAATGCTCTTCCTCCCGATT
CTCCTCGAATTTTGTTGTCAACAGGCAGACTTATTGGTGAGGGATTTGACCACCCTCCGCTGGATACGCTGATTCTTGCC
ATGCCTGTGTCATGGAAAGGGACATTACAGCAGTATGCAGGGCGTCTTCACAGAGAGCATACCGGTAAAAGCGATGTCAG
GATCATTGATTTTGTGGATACCGCGTATCCTGTGCTGCTCAGAATGTGGGATAAACGTCAGCGGGGTTATAAAGCGATGG
GGTACAGGATTATAGCTGACGGCGATGAATCAGTGATTTAA

Protein sequence :
MVHKSDSDELAALRAENARLVSLLEAHGIEWRRKPQTPVQRVSVLSTDEKVALFRRLFRGRDDVWALRWESKTSGKSGYS
PACANEWQARICGKPRIKCGDCAHRQLIPVSDLVIYHHLAGTHTVGMYPLLEDDSCYFLAVDFDEAEWQKDASAFMRSCD
ELGVPAALEISRSRQGAHVWIFFASRVSAREARRLGTAIISYTCSRTRQLRLGSYDRLFPNQDTMPKGGFGNLIALPLQK
RPRELGGSVFVDMNLQPYPDQWAFLVSVTPMNVQDIEPTILRATGSIHPLDVNFINEEDLGTPWEEKKSSGNRLNISIAE
PLKITLANQIYFEKAQLPQVLINRLIRLAAFPNPEFYKAQAMRMSVWNKPRVIGCAENYPQHIALPRGCLDSVLSFLRDN
NIAAELIDKRFAGTECNAVFMGNLRAEQEEAVSALLRYDTGVLCAPTAFGKTVTAAAVIAKRKVNTLILVHRTELLKQWQ
ERLAVFLQAGDSIGIIGGGKHKPCGNIDIAVVQSISRQGEVEPLVRNYGQIIVDECHHIGAVSFSAILKETNARYLLGLT
ATPIRRDGLHPIIFMYCGAIRHTAVRPKESPHNLEVLIRSRFTSGHLPSDARIQDIFREIALDHDRTVAIAEEAMKAFGQ
GRKVLVLTERTDHLDEIASVMNSLKLSPFILHGRLSKKKRAMLISGLNALPPDSPRILLSTGRLIGEGFDHPPLDTLILA
MPVSWKGTLQQYAGRLHREHTGKSDVRIIDFVDTAYPVLLRMWDKRQRGYKAMGYRIIADGDESVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 0.0 100
Z1568 NP_287072.1 helicase Not tested TAI Protein 0.0 100