Gene Information

Name : ECSP_1235 (ECSP_1235)
Accession : YP_003077158.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1322001 - 1322528 bp
Length : 528 bp
Strand : +
Note : -

DNA sequence : 
ATGATTCTGAAAGACGTGAATGAACACATGGAAGGTCTGTTTCAACGTTTTTCTAAACTGTTACCTTTCAGAATTGATTT
TGCCTACAGGAAAGACACGCCCAGTTTTGGTCATTCCTGTAGGCACAGTATGTGTATTGAAATGCACCGCTTACTTAGTG
AAACCCAAACGATGCTGGCGGGATATTACTGGGTAATGGAATATACGTCAAACAAGGGACTTCATATTCATTTTATCGGC
TACCTGGATGGGCAACGTCACAACAAATCTTATCGGATATCCAGGCAACTGGGAGATATCTGGAGGCGGATCACGGAAGG
GGAGGGTTATTTTCACCTGTGCAGGGCTAAAGACAAATACCCGGTGCGTATCGATCACGTAATTCACTATAGTGATAAAT
CTGCGGTAGACGACTTACGTTACGCCCTTAGCTATCTAGCCAAACAGGATCAGAAAGAACACGGTATTATTCTGAGGCGT
AGCAGGCTTCCCGAAAAAAGTAACCGGGGCCGACCACGACATAACTGA

Protein sequence : 
MILKDVNEHMEGLFQRFSKLLPFRIDFAYRKDTPSFGHSCRHSMCIEMHRLLSETQTMLAGYYWVMEYTSNKGLHIHFIG
YLDGQRHNKSYRISRQLGDIWRRITEGEGYFHLCRAKDKYPVRIDHVIHYSDKSAVDDLRYALSYLAKQDQKEHGIILRR
SRLPEKSNRGRPRHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 1e-81 100
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 1e-81 100
unnamed AAL08430.1 unknown Not tested SRL Protein 8e-77 94
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 1e-54 64
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 1e-54 64
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 2e-53 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECSP_1235 YP_003077158.1 hypothetical protein VFG1021 Protein 3e-77 94
ECSP_1235 YP_003077158.1 hypothetical protein VFG0646 Protein 4e-55 64