|
Name : clpB (TERTU_1057) Accession : YP_003072651.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Unknown Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1105113 - 1107752 bp Length : 2640 bp Strand : + Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGCGAATAGATCGCTTAACCAATCAGTTACAAATTGCGCTGTCTGATGCGCAATCTCTGGCCGTGGGGCGTGATCATAA CCAGATCGAGCCCGTTCATCTGTTACAGGCAATGCTCGACCAGCAGGGCGGGACCGTGCGTCCGTTGCTGGCGAGTGCGG GTTTTGACGTCGCCGGTTTACGTAATGAACTAACGAAAGCGCTCGAAAATCTTGCCCGGATTCAGAACCCCACTGGCGAT GTACATATGTCGCCAGAACTGGGCCGGCTATTGAACCTGGCCGATAAGCACGCACAGAAGAACGGCGATAAATTCATTTC CAGTGAAAGTTTGTTGCTCGCGGCCATGCGTGATGCCAACGCCGAGCTCGGCAAAATTTTGAATCGCTACGGCACTGCTG CGCGGTTGCAGTCTGCGGTGGATAAGGTGCGAGGTGGCGAAAAAGTAGATAACCCGGATGCAGAGGGTAACCGTCAGGCA CTTGAGAAATATACGATTGATCTTACCGCCCGCGCTGAGGCTGGCAAACTCGACCCCGTGATCGGTCGTGACGACGAAAT TCGCCGTACTGTCCAGGTGTTGCAACGACGAACGAAGAACAATCCGGTGTTGATCGGTGAGCCCGGCGTAGGCAAAACAG CGATTGTCGAGGGTCTGGCGCAGCGCATTGTTGATGGTGAAGTTCCTGAGGGTTTGAAAAACCGGCGCTTGCTGTCGCTC GATCTCGGCGCGCTGCTTGCCGGCGCCAAGTTTCGCGGTGAATTCGAAGAGCGATTGAAGTCAGTACTAAACGAGCTGGG CAAACAGGAAGGCCGGGTTGTTTTGTTTATCGACGAACTGCACACCATGGTGGGCGCGGGCAAAGCCGAAGGTGCAATGG ATGCCGGGAATATGTTGAAGCCGGCGCTCGCGCGTGGTGAGCTGCACTGCGTAGGAGCGACCACATTAGACGAATACCGG CAGTATATTGAAAAAGATGCGGCCCTGGAGCGTCGATTCCAAAAAGTGGTGGTCGATGAACCCAATGAGGAAGACACCAT CGCAATTTTGCGGGGTTTGAAAGAGCGTTACGAGCTGCATCACGGCGTTAACATCTCTGACTCCGCGATTATCGCAGCGG CAAAATTGTCGCAGCGCTATATCACGGATCGCCAGCTGCCAGACAAGGCGATTGATCTAATCGACGAAGCGGGCAGTCGT ATTCGGATGGAAATTGACTCTAAACCGGAGCAAATGGACCGCCTGGAGCGCAGGCTTATTCAGCTCAAAATCGAGCGGGA AGCAGTGAAAAAAGATGATGACACGGCTGCCCGGAAACGACTCGACCTGATTGAGTCGCAAATTGACGAAGCTGAGCGCG CGTATGCAGATCTCGATGAAATATGGCGTGCGGAAAAGGTTTCATTACAAGGTTCGCAGCAGATCAAAAGTAATTTGGAG CAAGCTCGCCTGGATTTGGAAGCAGCGCGGCGCGCGGGCGATTTAGGCCGGATGTCCGAATTGCAATACGGCATCATCCC AGAACTGGAAAAGCAGCTGGATATGGCTAGCCAGGCTGAAATGCACGAAATGAAGCTGCTTCGCAATAAAGTAACAGACG AGGAAATCGCAGAGGTTGTTTCCAAGTGGACCGGCATTCCTGTGTCCAAAATGCTCGAAGGTGAGCGCGAAAAATTGTTG CGCATGGAGGAGGTGTTGCATGAGCGTGTTATTGGTCAAAGTGAAGCCGTTATTGCGGTAGCGAATGCGGTTAGACGTTC GCGCGCTGGGTTGTCTGACCCCAATCGGCCGAATGGCTCTTTTCTGTTTCTGGGGCCGACCGGGGTGGGTAAAACTGAAC TTTGTAAAGCGTTGGCGGAATTCTTGTTTGACAGTCAGGACGCGATGGTACGCATCGATATGTCCGAGTTTATGGAAAAG CATTCAGTTGCGCGCTTGATTGGAGCACCACCCGGCTATGTTGGCTATGAGGAGGGCGGCTACCTCACGGAAGCAGTACG GCGCAAACCCTATTCCCTGGTGTTACTGGACGAAGTGGAGAAGGCGCACCCGGATGTGTTCAATATTTTATTACAGGTGT TGGAAGATGGGCGCTTAACGGATGGCCAAGGCCGTACTGTAGATTTTCGCAACACAGTCGTTGTGATGACCTCTAACCTT GGATCTGCTGCTATTCAGGATATTGCGCAAAACCGGGCATACGACAGTATCAATTTTGATGAGTCGTCGAGCCAGGATGA CAGCATGCAAAACGAACATAAATACGCGGCCATGAAAGATGCGGTCATGGAAGTTGTGGCAGGGCATTTCCGGCCAGAAT TTATTAACCGTATTGATGAAGTTGTCGTATTCCATCCGTTGGGCAAACCTCAAATTCGGGGCATTGCGGATATTCAGCTG GGAATTTTACGCAAACGCTTGCATGAGCGTGAATTGAAGCTGGATATGAGCAATGAGGTTATGGATAAAATCGCAGAGGC AGGTTTTGACCCGGTATACGGCGCTCGACCGCTCAAGCGAGCAATCCAGCAGCTGATTGAAAACCCGCTTGCGCAGGAGG TGTTGGCTGGCAAGTTCAGTCCTGGCCAAACGATCAAAGTAGACCTGGCTGGAAATGATAATGTGAGGTTCAGCGTTTAG Protein sequence : MRIDRLTNQLQIALSDAQSLAVGRDHNQIEPVHLLQAMLDQQGGTVRPLLASAGFDVAGLRNELTKALENLARIQNPTGD VHMSPELGRLLNLADKHAQKNGDKFISSESLLLAAMRDANAELGKILNRYGTAARLQSAVDKVRGGEKVDNPDAEGNRQA LEKYTIDLTARAEAGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVDGEVPEGLKNRRLLSL DLGALLAGAKFRGEFEERLKSVLNELGKQEGRVVLFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVVVDEPNEEDTIAILRGLKERYELHHGVNISDSAIIAAAKLSQRYITDRQLPDKAIDLIDEAGSR IRMEIDSKPEQMDRLERRLIQLKIEREAVKKDDDTAARKRLDLIESQIDEAERAYADLDEIWRAEKVSLQGSQQIKSNLE QARLDLEAARRAGDLGRMSELQYGIIPELEKQLDMASQAEMHEMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLL RMEEVLHERVIGQSEAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSLVLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNL GSAAIQDIAQNRAYDSINFDESSSQDDSMQNEHKYAAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGKPQIRGIADIQL GILRKRLHERELKLDMSNEVMDKIAEAGFDPVYGARPLKRAIQQLIENPLAQEVLAGKFSPGQTIKVDLAGNDNVRFSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-159 | 44 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-95 | 41 |
