Gene Information

Name : TERTU_0838 (TERTU_0838)
Accession : YP_003072448.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Virulence
Product : alkaline phosphatase synthesis PhoB family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 894341 - 895042 bp
Length : 702 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence :
ATGGCAGAGAACATTCTTGTAATAGAAGATCAGGAAGAAATTAACGAGCTGATCGCGCTGAACCTGGAAACACTGAACTA
CACAGTTACCCGTGCGCTAGATGGCGATATCGGACTGAACCTAAGCCTCAATACCCGCTTTGACCTGATCATTCTCGACG
TCATGCTGCCGGGCATCGATGGCCTGCAAATCTGTCAAAAGTTGCGTAGCGCAGGCGTGTTGACGCCAATTCTGATGCTC
ACAGCAAAAAAATCCGAAGCAGATCGGGTTGTTGGTCTGGAAGTGGGCGCCGATGACTACCTGACCAAACCCTTCAGTGT
GCGGGAACTCCAGGCCCGTGTTCGCGCGCTCCTGCGACGTGTCGCTTTTAATACCCAGGAAACCAATCCTACGGCCGGCC
CCGACCAGCTGGTGTTTGGCGACCTTAGTATCAACAAAAACAAACACGTGGTTACCTTGGCGGATGAGGAGATTAAACTC
ACCGCAAAAGAATTCGACCTACTTCTGTATCTGGCCAGTTCTCCCGGTCAGGTTTTTAGCCGCGACCAGCTCCTGAGTGC
CGTTTGGGGCTATCACCACAGCGGCTATGAACACACTGTTAATTCACATATTAACCGACTACGCGCAAAGCTGGAGCCCA
ACGCCAGCGAACCTCGCTACGTGCTCACAGTCTGGGGGGTGGGGTATAAATTTTATGAATAG

Protein sequence :
MAENILVIEDQEEINELIALNLETLNYTVTRALDGDIGLNLSLNTRFDLIILDVMLPGIDGLQICQKLRSAGVLTPILML
TAKKSEADRVVGLEVGADDYLTKPFSVRELQARVRALLRRVAFNTQETNPTAGPDQLVFGDLSINKNKHVVTLADEEIKL
TAKEFDLLLYLASSPGQVFSRDQLLSAVWGYHHSGYEHTVNSHINRLRAKLEPNASEPRYVLTVWGVGYKFYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-39 48
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-39 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002952.2859905.p0 Protein 8e-38 47
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_007622.3794472.p0 Protein 8e-38 47
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002745.1124361.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_009782.5559369.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002951.3237708.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_003923.1003749.p0 Protein 9e-38 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002758.1121668.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_009641.5332272.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_013450.8614421.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_007793.3914279.p0 Protein 1e-37 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator HE999704.1.gene2815. Protein 1e-39 46
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator AE016830.1.gene1681. Protein 5e-41 45
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_012469.1.7685629. Protein 1e-34 45
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator AE000516.2.gene3505. Protein 8e-36 44
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator DQ212986.1.gene4.p01 Protein 1e-32 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_012469.1.7686381. Protein 1e-37 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator FJ349556.1.orf0.gene Protein 5e-28 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator CP001918.1.gene5135. Protein 6e-21 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator CP001138.1.gene4273. Protein 3e-21 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator BAC0533 Protein 3e-21 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator CP000647.1.gene4257. Protein 3e-21 42
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_003923.1003417.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_013450.8614146.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002951.3238224.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_007793.3914065.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002758.1121390.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_010079.5776364.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002952.2859858.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_007622.3794948.p0 Protein 5e-28 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator EU250284.1.orf4.gene Protein 1e-29 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator AF130997.1.orf0.gene Protein 5e-32 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator AM180355.1.gene1830. Protein 2e-32 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator CP000034.1.gene3671. Protein 2e-31 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator NC_002695.1.915041.p Protein 1e-20 41
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator CP000034.1.gene3834. Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator VFG1702 Protein 2e-39 48
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator VFG1563 Protein 3e-39 47
TERTU_0838 YP_003072448.1 alkaline phosphatase synthesis PhoB family transcriptional regulator VFG0596 Protein 7e-27 41