Gene Information

Name : TERTU_4674 (TERTU_4674)
Accession : YP_003075896.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Resistance
Product : macrolide export ATP-binding/permease MacB
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 5127750 - 5128430 bp
Length : 681 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGATAACGATCAAAAATCTCTGCAAAGCCTACGGGGATGAGGCGCAGCGGTTGCAAGTGCTCAAGGGGTTGGACCTGTC
CATCCGCGAGGGTGAGCTTGTTTCCATTATGGGTTCCTCCGGTTCGGGTAAATCCACTCTGCTGAATATTCTCGGCTTGC
TGGATCGCCACGACAGTGGCGTGTATGAACTGGCGGGGCAGCGGATTGGCAAATTGAGCGAATCCCAGGCCGCGCAACTG
CGCAACCGCTATCTTGGCTTTGTGTTCCAGTCGTTTAATCTGCTGCCGTTCAAAACCGCGCAGGAAAATGTTGCCCTCCC
CCTCTATTACCAGAAAGTCTCTCGCAAAAAGCGCAATGCAATGGCACTCGAGTATCTCGAGCGCGTCGGTTTGGCGGAGC
GAGCGAATCACCATCCGGGTGAACTATCCGGCGGCCAGAAGCAGCGGGTGGCATTGGCGCGCGCGCTGATCACCGACCCG
CAGGTGATTCTCGCCGACGAACCTACCGGCGCACTGGATTCCAAAACTTCCGATGAAGTCATGGCTTTGTTCAAGCAAGT
CCACAGCAGCGGCAAAACCATTGTTATCGTCACCCATGAAGACGAGATTGCCGCGCAAACACAGCGTTTAATTCACCTCA
AAGACGGTCAGATAATCGAAGATCGTGCCACGGCCGGGTGA

Protein sequence :
MITIKNLCKAYGDEAQRLQVLKGLDLSIREGELVSIMGSSGSGKSTLLNILGLLDRHDSGVYELAGQRIGKLSESQAAQL
RNRYLGFVFQSFNLLPFKTAQENVALPLYYQKVSRKKRNAMALEYLERVGLAERANHHPGELSGGQKQRVALARALITDP
QVILADEPTGALDSKTSDEVMALFKQVHSSGKTIVIVTHEDEIAAQTQRLIHLKDGQIIEDRATAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-34 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-34 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_4674 YP_003075896.1 macrolide export ATP-binding/permease MacB NC_012469.1.7686878. Protein 2e-54 54
TERTU_4674 YP_003075896.1 macrolide export ATP-binding/permease MacB NC_008702.1.4606598. Protein 2e-37 45
TERTU_4674 YP_003075896.1 macrolide export ATP-binding/permease MacB CP001581.1.gene598.p Protein 2e-35 43
TERTU_4674 YP_003075896.1 macrolide export ATP-binding/permease MacB NC_012469.1.7686946. Protein 1e-32 42
TERTU_4674 YP_003075896.1 macrolide export ATP-binding/permease MacB CP001581.1.gene798.p Protein 8e-36 42