Gene Information

Name : glnA (TERTU_4421)
Accession : YP_003075672.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 4895262 - 4896668 bp
Length : 1407 bp
Strand : +
Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653

DNA sequence :
ATGTCAGAGCAGACTCTGAATCTGATTAAAGAAAACGAAGTTCGCTGGGTAGACCTGCGTTTTACCGATACTAAAGGTAA
AGAGCAGCACGTAACCATCCCCTCGTCCTATGTGGACGAAGATTTTTTCACCACCGGTCAGATGTTTGATGGCTCCTCCA
TTTCTGGTTGGAAAGGCATCAACGAGTCCGACATGATCTTGATGCCAGACGACACTACCTCTGTGCTGGATCCGTTCACC
GATGAGCCTACCGTTATCTTGCGTTGCGATATCGTTGAACCTTCTACTGGCGAAGGTTACGAGCGCGATCCACGCTCTGT
CGCCAAACGCGCAGAAGAATACCTGAAGTCCACTGGTCTCGGCGATACTGCTTTCTTCGGCCCAGAACCAGAATTCTTTA
TCTTCGACGACGTCAAATGGGGTCAGGACATGAGCGGCAGCTTCGTGAAGATTTCTTCCGAAGAAGCAGCCTGGGCTACC
GGTCACGACTTCTCTGAAGGCAACATGGGCCACCGTCCGCGCGTTAAAGGCGGTTACTTCCCCGTTCCTCCAGTGGACTC
ACTGCACGATATCCGTTCTGCCATGTGTAACGCCATGATCCAAATGGGTCTGGACGTTGAAGTTCACCACCACGAAGTGG
CAACTGCAGGCCAGAACGAAATCGGTGTTAAGTTCAACACTCTGGTTAAGAAAGCGGACGAAGTACAGATCCTGAAATAC
TGTGTACACAACGTGGCGCACGCTTACGGCAAAACGGCAACCTTTATGCCTAAGCCTATCGTTGGCGATAACGGTTCCGG
CATGCACTGCCACCAGTCTTTCTGGAAAGATGGCGAAAACCAGTTCGCAGGCGATGGCTACGCTGGCCTGAGCGAAACTG
CCCTGTACTACATCGGCGGTATCATCAAGCACGCTAAAGCACTGAACGCGTTTACTAACCCAGGCACCAACTCCTACAAG
CGTCTGATCCCTGGTTTTGAAGCGCCAGTAATGCTGGCTTACTCTGCACGCAACCGTTCTGCATCGATTCGTATTCCTTA
CGTCGCCTCACCAAAAGGCAAGCGTATCGAAGCGCGTTTCCCTGACCCCATCGCCAACCCATACCTGGCATTCGCTGCCA
TGTTGATGGCTGGCCTGGACGGCGTGAAAAACAAACTTCACCCTGGCGATGCTGCAGATAAAGACCTTTACGATCTGCCT
AAAGAAGAAGCGGATGCTATTCCACAGGTATGTGGCAGCCTGCGTGAAGCACTGTCCAGCCTGAATGCAGACCGCGAGTT
CCTCACCGCTGGTGGCGTTTTCACCGACGACATGATCGACGCATACATCGACCTGAAAATGGAAGACGTATACCGCGTTG
AGCACACTACTCACCCAGTTGAGTTCGACCTCTACTACTCTGTATAA

Protein sequence :
MSEQTLNLIKENEVRWVDLRFTDTKGKEQHVTIPSSYVDEDFFTTGQMFDGSSISGWKGINESDMILMPDDTTSVLDPFT
DEPTVILRCDIVEPSTGEGYERDPRSVAKRAEEYLKSTGLGDTAFFGPEPEFFIFDDVKWGQDMSGSFVKISSEEAAWAT
GHDFSEGNMGHRPRVKGGYFPVPPVDSLHDIRSAMCNAMIQMGLDVEVHHHEVATAGQNEIGVKFNTLVKKADEVQILKY
CVHNVAHAYGKTATFMPKPIVGDNGSGMHCHQSFWKDGENQFAGDGYAGLSETALYYIGGIIKHAKALNAFTNPGTNSYK
RLIPGFEAPVMLAYSARNRSASIRIPYVASPKGKRIEARFPDPIANPYLAFAAMLMAGLDGVKNKLHPGDAADKDLYDLP
KEEADAIPQVCGSLREALSSLNADREFLTAGGVFTDDMIDAYIDLKMEDVYRVEHTTHPVEFDLYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-107 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003075672.1 glutamine synthetase VFG1399 Protein 4e-109 52