Gene Information

Name : TERTU_3928 (TERTU_3928)
Accession : YP_003075220.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 4336866 - 4339187 bp
Length : 2322 bp
Strand : -
Note : identified by match to protein family HMM PF00575; match to protein family HMM PF09371

DNA sequence :
ATGATAAGTATTACCAGTCGCATAGCCCAGGAATTGAACACCCACGAACGTCAGGTCGCCGCTGCAGTGGCGCTGCTGGA
CGAGGGTGCCACCGTACCGTTTATTGCTCGTTACCGAAAAGAAGTGACCGGCGGCCTCGACGACAGCCAGTTGCGTTTAC
TCGACGAGCGTCTGGGCTATTTACGTGAGCTGGAAGACCGGCGCGAGACCATCCTCAACTCTATTGCTGAGCAGGAAAAA
CTAACCCCAGAGCTGGAAGCGCAGATTAAATCTGCCGAAACCAAAACCCAGCTCGAAGACCTCTACCTGCCTTATAAACC
CAAACGCCGCACCAAAGCGCAGATCGCCCGCGAAGCCGGTTTGGAGCCGTTGGCAGACCTGTTGTTGGCAGACCCCACCC
GCAACCCTGAAGACGAAGCGGCCGCTTTTCTCAATGCGGAACACAAAATTGACGATGCCAAGGCGGCATTGGATGGCGCC
AAACAGATTTTGATGGAGCGCTTCAGCGAAGATGCGCAACTCCTTGAAAAGCTGCGTAATTTCCTGACCCACGAGAGCTT
TTTACAAGCCAAGCTGGTCGACGGTAAAGAGCAGGAAGGCGCTAAGTTTCGCGATTATTTTGAACACAGTGAGCCGTTTG
GCAAAGTGCCCAGCCACCGCGCGCTGGCGATGTTCCGCGGCCGCAACGAGGGAATTTTGACCTTGGCGCTTACCCTGGAC
CCCACTGCGGAGTCGCCGGTTGGCACTGTGCATCCCTGCGAGATCTCGATTGCAGAGCATTTTGACATTAAAGACCAGAG
CCGCGCTGCAGACAAATGGCTAGCAGAGGTGGTGCGCTGGACCTGGCGGGTGAAGCTTTACACCCACTTGGAAACCGATC
TCCTGGGCGGCCTGCGCGAACGCGCGGAGGCGGATGCTATCGAGGTCTTTGCCAGCAATCTCAAAGACCTGCTGCTGGCG
GCACCGGCTGGTCCCAAAGCGACAATCGGTCTGGACCCGGGTCTGCGCACCGGGGTGAAAGTCGCCGTGGTGGATGCGAC
AGGCCAGGTGCTTGATCACGGGGCGATTTTTCCGACTCCGCCGCAAAACCGTGTGATGGAAGCAGAAGCCACGCTGGTGG
CGCTCTGCAAAAAGCATAATGTCAGTTTGATAGCGATTGGAAACGGTACAGCATCGCGCGAAACGGATAAGTTTGTCGGC
GATATGCTCAAAGCCCACAAAGACCTGAAAATCCAAAAAGTCATGGTTAACGAAGCTGGGGCTTCGGTGTACTCGGCGTC
AGAGTTTGCTGCCAAAGAGTTCCCGGACCTGGACGTAACTATCCGCGGCGCTGTGTCTATTGCGCGCCGCCTGCAGGACC
CGCTCGCTGAACTGGTGAAAATCGATCCGAAATCCATTGGTGTCGGTCAGTATCAGCACGATGTTTCGCAAACGCGATTG
GCGAAATCACTGGATGCGGTAGTCGAGGATTGTGTAAATGGCGTGGGTGTCGAGATCAATACCGCATCGGCACCCCTACT
GGCGCGGGTGGCGGGCCTTAATTCCTCGGTGGCGAACAATATTATCGACTTCCGCAACAAAAACGGCGCATTCAGCAACC
GCAAACAGTTGCTGGAAGTCTCTCGCCTGGGCGCCAAGGCGTTCGAGCAGTGCGCGGGCTTTTTGCGCATCGCCAATGGC
GATAACCCGCTGGATGCCTCCGGTGTGCACCCGGAAGCCTATGAAGTGGTCGAGCAGATCGCTGCGCGCAACAAGCGTGA
GGTGAGAGGTTTGATCGGAGATACCGGGTTTTTACGCGGGCTGAAAGCGGGCGATTACACTAACGAGAAGTTTGGTGTGC
CCACGGTGACCGATATTCTGCAGGAACTGGACAAGCCCGGCCGCGACCCGCGCCCGGAGTTTAAAACCGCGCAATTCCAG
GAAGGTGTTGAGAAGGTCTCTGACCTGGAACCCGGCATGATTCTGGAGGGTACGGTAACCAACGTGACAAATTTCGGTGC
TTTTGTCGATGTGGGCGTACACCAGGACGGTTTGGTGCACATTTCTGCGCTCTCCAATACCTTCGTTAAAGATCCGCGCG
AAGTGGTGAAAGCTGGCGATATTGTTAAAGCAAAAGTGATGGAAGTGGATGTGGACCGCAAGCGGATCGCGCTGTCCCTG
CGGCTGGACGATACGCCCGGAGAAAAAACCAGCACTGCGGGTCAGCCTCGTCGCGCGCCGAAGCAGCGTCAGGCGCACGG
TGCGCAGCCGAAAACTGGGGCTCCCAAAAACGGGACTATGGCAGCGCTGTTTGAAGCGGCGGCGAAAAAGCAAAAGCGTT
GA

Protein sequence :
MISITSRIAQELNTHERQVAAAVALLDEGATVPFIARYRKEVTGGLDDSQLRLLDERLGYLRELEDRRETILNSIAEQEK
LTPELEAQIKSAETKTQLEDLYLPYKPKRRTKAQIAREAGLEPLADLLLADPTRNPEDEAAAFLNAEHKIDDAKAALDGA
KQILMERFSEDAQLLEKLRNFLTHESFLQAKLVDGKEQEGAKFRDYFEHSEPFGKVPSHRALAMFRGRNEGILTLALTLD
PTAESPVGTVHPCEISIAEHFDIKDQSRAADKWLAEVVRWTWRVKLYTHLETDLLGGLRERAEADAIEVFASNLKDLLLA
APAGPKATIGLDPGLRTGVKVAVVDATGQVLDHGAIFPTPPQNRVMEAEATLVALCKKHNVSLIAIGNGTASRETDKFVG
DMLKAHKDLKIQKVMVNEAGASVYSASEFAAKEFPDLDVTIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTRL
AKSLDAVVEDCVNGVGVEINTASAPLLARVAGLNSSVANNIIDFRNKNGAFSNRKQLLEVSRLGAKAFEQCAGFLRIANG
DNPLDASGVHPEAYEVVEQIAARNKREVRGLIGDTGFLRGLKAGDYTNEKFGVPTVTDILQELDKPGRDPRPEFKTAQFQ
EGVEKVSDLEPGMILEGTVTNVTNFGAFVDVGVHQDGLVHISALSNTFVKDPREVVKAGDIVKAKVMEVDVDRKRIALSL
RLDDTPGEKTSTAGQPRRAPKQRQAHGAQPKTGAPKNGTMAALFEAAAKKQKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61