|
Name : TERTU_3816 (TERTU_3816) Accession : YP_003075113.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 4212718 - 4213686 bp Length : 969 bp Strand : + Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGTCCGAAACCGATCTAATTCAATCCGCGCAACGCACAATCGCGCTGGAGATTGCCGCCGTTCAAGCGCTAGAAGAGCG CATCAACGGTGAATTTGTCGCTGCCTGTGAAAAAATTCTGAGCTGCTCCGGACGCGTCGTGGTTTCGGGTATGGGGAAAT CCGGCCACATCGGCAAAAAAATCGCCGCAACTCTGGCCAGTACGGGTACACCCGCATTTTTTGTGCATCCCGGGGAAGCG AGCCACGGCGATCTGGGGATGATCACCAGAGACGATGTTTTCCTGTGTATCTCCAACTCCGGTAACTCGCCTGAGATGGT TGCCATTTTGCCTTGGATAAAACGCATGGGCATTCCCGTGGTGGCGATGACAGGTAAATCCAACAGCCCTCTCGCTGAAG CGGCGGATGTGATACTCGATATCGCGGTCGCCACCGAAGCCTGCCCGCTGGATCTGGCGCCCACATCCTCAACCACAGTG ACGCTGGTGCTCGGTGATGCGCTGGCGCTCGCACTTCTGGAGGCGCGGGGGTTCACTGCCGAAGACTTTGCCTATTCTCA CCCAGGCGGCACTCTCGGACGGCGCTTACTATTGCATGTCGCTGACGTGATGCACGATGGTGAAACCGTTCCAATAGTTA CAACCACGACCCCGGTGCTGGAGGCTCTCGGCGAAATGAGCCGCAAAGGGTTCGGCATTACCACCGTAGTAGATGCGACA GGTGAGCTGGTCGGGGTGTTCACCGACGGCGATCTACGCCGCTGCCTGGATCGTGATATCGAGGTAAAAAACGCCAGTAT TGAACAGGTGATGAGTCGAGGTGGTCGAACAATTACGCCGCAGGCACTAGCCGCGGAAGCCTTCAACCTGATGGAAACCC ATAAAATTACCGCCCTGGTTGTCACTGATAACAACAAACCCGTGGGCATTTTGCATATGCATGACATGCTCCAGGCCGGG CTGGTTTAA Protein sequence : MSETDLIQSAQRTIALEIAAVQALEERINGEFVAACEKILSCSGRVVVSGMGKSGHIGKKIAATLASTGTPAFFVHPGEA SHGDLGMITRDDVFLCISNSGNSPEMVAILPWIKRMGIPVVAMTGKSNSPLAEAADVILDIAVATEACPLDLAPTSSTTV TLVLGDALALALLEARGFTAEDFAYSHPGGTLGRRLLLHVADVMHDGETVPIVTTTTPVLEALGEMSRKGFGITTVVDAT GELVGVFTDGDLRRCLDRDIEVKNASIEQVMSRGGRTITPQALAAEAFNLMETHKITALVVTDNNKPVGILHMHDMLQAG LV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-52 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-52 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-51 | 44 |
