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Name : pilB (TERTU_3034) Accession : YP_003074411.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3387856 - 3389583 bp Length : 1728 bp Strand : + Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538 DNA sequence : ATGAATAGTTCAGCAAATCTCAGCGGATTGGCACGCCGACTCGTCCGAGACAGCCTCATCTCAGAAGAAGATGCGCAGAA AGCCATTACCGGCGCAGCTAAAGACAAAATCCCGCTAGCGCTATACTTGGTCAAAAACAGTTCTCTTGATAGTCGGCAAA TTGCGGAGTCCGCCGCGGACGAATTCGGTACACCACTCATTGATCTTCAGTGTATAAACGATACCTCTTCTGTCAAAGGT GTAGTAGACGCCAAACTTATTCATAAACACCACGCATTACCCTTGTACAAGCGTGGCAATCGCTTGTTCCTTGCTCTTTC AGACCCCACCAACCTTCATGCCCTTGACGAAATCAAATTTAACACAGGCCTGAACACCGAAGCGCTCTTGGCGGAAGCAG ACAAGCTCCATGCTGCAATCGAAGCCTTTCTTCATTCTGAGGAAGAAGGAATCGGGGATGCGCTGGGAGGCCTGGACGAG GAAGCACTAGACTCGCTTGATATCGAAGCAGTGGACGAGGACGGAGGCGGTAGCCAGGAGGACGCATCCGAGGCTGACGA GGCTCCGATAGTGCGCTTTGTAAACAAAGTTCTGCTTGACGCCATCAAACTCGGCGCATCAGATATTCATTTTGAGCCCT ATGAAAAAGCCTACCGCGTGCGCTTTCGCGCAGACGGTATTCTGAAGGAGGTTGCCCGCCCTCCGGTCAACCTGGCCACT CGCCTGGCTGCACGCCTAAAAGTGATGTCACAAATGGATATTTCCGAGCGCAGGGTCCCTCAGGACGGCCGGATAAAGAT GAAAATATCCAAAACCCGCGCGATTGATTTCCGGGTAAACAGCTTGCCGACGCTGTTTGGTGAAAAGATCGTTCTACGAA TTTTGGATCCTTCAAGCGCGAAGCTCGGTATTGACGCCCTGGGTTACGAGGAAGAGCAGAAAAAAATGTACCTCGATGCG TTGGCGCAACCACAGGGCATGATTCTGGTAACAGGCCCTACTGGCTCGGGCAAAACCGTATCGCTCTATACCGGTCTGAA TATTCTAAATACCACCGAGCGCAACATATCCACCGCGGAAGATCCTGTAGAAATCAACCTGGAAGGCATCAACCAGGTCA ATATGAACACTAAAGTCGGGCTTACGTTTGCAGAAGCACTGCGCTCATTCCTTCGGCAGGACCCTGATATCGTGATGGTC GGGGAGATCCGGGACCTGGAAACCGCCGAAATCGGGATAAAAGCCGCGCAAACAGGTCACTTGGTGCTGTCGACCCTACA CACCAACAGCGCCCCAGAAACGCTTACCCGACTGCTCAACATGGGCGTACCCACCTTCAACGTCGCCACAACCGTAAGTT TGATCATTGCGCAACGATTGGCTCGGCGACTCTGCAGCGCCTGTAAAAAGCCAGCGACCGATATTCCTGAAGAAATTCTA AATGAAGAAGGCTTCTATAATATTGGCATGGAAAAGAACGAAATCACACTTTTTCACCCTGTGGGTTGCGACAAATGCAA TGAAGGTTATAAAGGTCGTGTGGGAATTTACGAGGTGGTGCGTATCACAGACGAAATCTCGCGAATTATCATGGAAGGCG GCAATTCTATTCAAATTGCCGACGCGGCCAGGAAGGCAGGCTTTCACGATTTAAGAACCTCCGCCCTGCGAAAGGCGGCA ATTGGCGTTACCAGCCTAGAAGAAGCAAACCGAGTAACCAAGGATTAA Protein sequence : MNSSANLSGLARRLVRDSLISEEDAQKAITGAAKDKIPLALYLVKNSSLDSRQIAESAADEFGTPLIDLQCINDTSSVKG VVDAKLIHKHHALPLYKRGNRLFLALSDPTNLHALDEIKFNTGLNTEALLAEADKLHAAIEAFLHSEEEGIGDALGGLDE EALDSLDIEAVDEDGGGSQEDASEADEAPIVRFVNKVLLDAIKLGASDIHFEPYEKAYRVRFRADGILKEVARPPVNLAT RLAARLKVMSQMDISERRVPQDGRIKMKISKTRAIDFRVNSLPTLFGEKIVLRILDPSSAKLGIDALGYEEEQKKMYLDA LAQPQGMILVTGPTGSGKTVSLYTGLNILNTTERNISTAEDPVEINLEGINQVNMNTKVGLTFAEALRSFLRQDPDIVMV GEIRDLETAEIGIKAAQTGHLVLSTLHTNSAPETLTRLLNMGVPTFNVATTVSLIIAQRLARRLCSACKKPATDIPEEIL NEEGFYNIGMEKNEITLFHPVGCDKCNEGYKGRVGIYEVVRITDEISRIIMEGGNSIQIADAARKAGFHDLRTSALRKAA IGVTSLEEANRVTKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-85 | 45 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-84 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 2e-179 | 63 |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 2e-156 | 56 |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 1e-126 | 48 |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 7e-82 | 46 |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 9e-89 | 46 |
| pilB | YP_003074411.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 1e-84 | 45 |
