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Name : gspF (TERTU_0267) Accession : YP_003071944.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 285525 - 286757 bp Length : 1233 bp Strand : + Note : identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120 DNA sequence : ATGGGTGCATACAGTTATCAGGCGCTTGATGCCAAAGGCAAAACCGTTAAAGGGGTCATCGAAGGAGACTCCGAGCGCCA CGTGCGCAACCAGTTGCGGTCCAAACAGCTCAAGCCATTACAGGTAAAAACCACGCGTCAGCGCGGGCCTGCTGCAGGCA GTAAAGATTCAGGATTCTCCCTGTTTAACCGCCGTCCGCATATGGGCTACCGGGACGTATCGCTGGTGACCCGTCAGCTG GCGTCGCTGGTGCAATCCGGTTTGCCACTGGATGAAGTGCTTGCATCGACCGCCAAGCAAAGCCGCAAGCCGGCAGCCAA AACCATCATGTTGCAAGTACGCTCGCGGGTGTTGGAGGGGTTGAGCCTGGCCCAAGCCATGGCGGAAATACCGCGTGTAT TTGATGGCCTTTATCGGGCAATGGTGCGCGCGGGGGAATCCTCTGGTTATCTTGGCCCGGTGTTGGAGCGCCTCGCGGAC TACACCGAGCGCAGCCAGGAAACCAAGCAAAAACTTAAAGGTGCAATGGTCTACCCCATCATCATGATGTTGGTCAGTAT TTCCGTTGTCACTCTGATGATGGTGAAGGTGGTGCCCAATCTGGTGGGCATGTTCGAACGCAACAAACAAGAACTGCCGT TTGTTACCAAGTTTCTTATTGGCGCCAGTAATTTTCTGGTGAATTACGGTGTGTTTTTACTACTGGGCATTGTCGGGTTG ATTATCGCTTTTCAGTGGGCCTTGCGCGCTGAATCACGGCGTAAAAAATGGCACAGCATTCTGTTGCGTGCGCCGGTTAC CGGCAACCTGATTTTGCAGGCCGAGAGTGCGCGTTACGCAAGTACCCTGGGGTTGTTGGCCAACAGTGGCGTGCCTCTGC TGGAAGCATTGCGTATTGCTGCGCAGGTGCTCACCAACCACGAATTACGCGCGGCGGCGAAAGAAGTCGCGGTTCTGGTG CAGGAAGGTTCGAGTTTGCACAAAGCTTTAGACTCGGTAGAAGTGTTTCCGCCGTTGCTCGTGCAGATGGCCGCCAGTGG CGAGGCTAACGGTAAGCTTGCCGAGCAGCTGTTACACGCGGCGCGCAACCAGGAGCGCGAGTTGGAATTTACGGTGAACA CGGCGCTGGGTTTGATGGAGCCGTTTATGGTGTTGTTTATGGGCGGTGTCGTCACCTTCATCGTGATTGCGATTTTGTTG CCCATTTTCCAAATGAACCAAATGGTAAGCTAA Protein sequence : MGAYSYQALDAKGKTVKGVIEGDSERHVRNQLRSKQLKPLQVKTTRQRGPAAGSKDSGFSLFNRRPHMGYRDVSLVTRQL ASLVQSGLPLDEVLASTAKQSRKPAAKTIMLQVRSRVLEGLSLAQAMAEIPRVFDGLYRAMVRAGESSGYLGPVLERLAD YTERSQETKQKLKGAMVYPIIMMLVSISVVTLMMVKVVPNLVGMFERNKQELPFVTKFLIGASNFLVNYGVFLLLGIVGL IIAFQWALRAESRRKKWHSILLRAPVTGNLILQAESARYASTLGLLANSGVPLLEALRIAAQVLTNHELRAAAKEVAVLV QEGSSLHKALDSVEVFPPLLVQMAASGEANGKLAEQLLHAARNQERELEFTVNTALGLMEPFMVLFMGGVVTFIVIAILL PIFQMNQMVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-65 | 43 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-65 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_003071944.1 | general secretion pathway protein F | VFG0181 | Protein | 5e-87 | 46 |
| gspF | YP_003071944.1 | general secretion pathway protein F | VFG2049 | Protein | 2e-63 | 43 |
| gspF | YP_003071944.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-71 | 41 |
