Gene Information

Name : rdgC (TERTU_2544)
Accession : YP_003073970.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2825667 - 2826596 bp
Length : 930 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAACCTGCGCGTGTATCGCTTAACACGCGCTTTTGAATCCTCCCCGGAAGCGCTTGCCGAAACCCTGGA
GAACTTTGCGTTCCAACCCTGCGGCAAGCTCGATCCGGTACGCTACGGCTGGGTACCCCCGCTAGGTCGCCATGGCACAT
CACTGGTACACGCCACCAATGGCAATATTATGGTGTGCGCCAAGCGGCAAGAAAAAATTCTTCCCGCTGCCGTGGTCAAA
GAAGAGCTGGACGAACGCGTGGCCGCTATCTCAGCAGAGGAAGGTCGCCATGTGGGCCGCAAGGAGCGCGACAGCCTGAA
GGACGAAGTGATCTTTGATCTGCTACCTCGGGCATTGGCAAAGTCCTCTATGGATTTTGCCTACATCGCCCCGAGCGAGC
GCCTGGTGTACGTTAACGTCACCAGCAGCAAGCGCGCTGAGGAGCTGCTCAGTGCGTTGCGCGAAGCCCTGGGCACTATG
TCTGCGATCCCCCTGAACAGCGTAAACCCACCCGTTGCCAGCATGACCGAATGGCTGCGCAGCTCAGAGCTGCCTGCGCC
GTTTCAGTTGGGCGAAGAATGCGAGCTGCAAGCACCTAAAGACGATCGCATTATCCGTTGTAAAAATCAGGACCTTACCG
CAGATGAAATTCTGAACCACATCCATTCCGGTATGGTCGTCAACAAACTTGCACTTACATGGAACGACGCAATCCATTTT
ATTGTGGACGATCAGCTTGCCATTAAACGGCTGAAATTCGATGATAAATTGCTCGAACTGGCAGGAGAACGAAACCCGGA
ATCGGCTGCAGAAGAATTCGATACAGATTTCGCCGTGATGTCCACAGAACTAAAACAATTCGTAGCAGACCTGTTAAATG
CGTTTGGCGGCATCAACGAGAGCGCGCCAGCAATAGAAGCAGACCAATAA

Protein sequence :
MWFKNLRVYRLTRAFESSPEALAETLENFAFQPCGKLDPVRYGWVPPLGRHGTSLVHATNGNIMVCAKRQEKILPAAVVK
EELDERVAAISAEEGRHVGRKERDSLKDEVIFDLLPRALAKSSMDFAYIAPSERLVYVNVTSSKRAEELLSALREALGTM
SAIPLNSVNPPVASMTEWLRSSELPAPFQLGEECELQAPKDDRIIRCKNQDLTADEILNHIHSGMVVNKLALTWNDAIHF
IVDDQLAIKRLKFDDKLLELAGERNPESAAEEFDTDFAVMSTELKQFVADLLNAFGGINESAPAIEADQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-55 42