Gene Information

Name : TERTU_2408 (TERTU_2408)
Accession : YP_003073837.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Virulence
Product : response regulator receiver domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2677200 - 2677853 bp
Length : 654 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence :
GTGACAAGAATTTTGGTCGCCGACGATCACGACCTGGTTCGCATGGGTATTGTACGCATGCTTCAGGACGTCGAAGGTTT
CGAAGTTGTAGGCGAAGCAAAAACCGGCGAGCAAGCGATAGCCCTCTCTCGAGAGTTGCAGCCGCAAGTTGTGCTTATGG
ATGTAAAAATGCCAGGCATCGGTGGCTTGGAAGCAACCCGTAAAATCCTGGCATCCTGCTCCCATACCCGTGTGGTTGCG
GTTACCGCAGTGTCCGACGATCTGTTCCCGGAGCGGTTGATGAAAGCCGGTGCGTCTGGTTATGTCACCAAAGGCGCCGG
ATTCGACGAAATTATCGATGCTGTTCACTCCGTAATGAATGGCAACTTATATATGAGTTCCACTATTGCCCAGCAGTTGG
CGCTTCGTACGTTTTCTGGAGCCAAAGGTGATGCTTCCCCGTTCGAGGCGTTGTCGGAGCGCGAGCTGCAAACGGCGATT
ATGATTGCCAACGGATCTCGGGTTCACGAAATTGCAGAGTCGTTTTGCGTCAGCCCGAAAACAGTCAATACCTATCGATA
CCGTATTTTTGATAAACTCAGCATCAATAGCGACGTAGAGCTGGCTCTGCTCGCGGTAAAGCACAAATTACTTGATGTCG
ATAGCTTGTCTTAA

Protein sequence :
MTRILVADDHDLVRMGIVRMLQDVEGFEVVGEAKTGEQAIALSRELQPQVVLMDVKMPGIGGLEATRKILASCSHTRVVA
VTAVSDDLFPERLMKAGASGYVTKGAGFDEIIDAVHSVMNGNLYMSSTIAQQLALRTFSGAKGDASPFEALSERELQTAI
MIANGSRVHEIAESFCVSPKTVNTYRYRIFDKLSINSDVELALLAVKHKLLDVDSLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-51 52
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-51 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_2408 YP_003073837.1 response regulator receiver domain-containing protein VFG1889 Protein 2e-48 45