Gene Information

Name : TERTU_2297 (TERTU_2297)
Accession : YP_003073745.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Virulence
Product : Helix-turn-helix
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2465684 - 2465905 bp
Length : 222 bp
Strand : +
Note : identified by match to protein family HMM PF01381

DNA sequence :
ATGAGCCCCATCAAAATATCAAATAATATTCGTCGCTTTCGCTTTGAAGCTAGCGAAATGAGTCAAGCTAGTTTAGCTAA
AGCTGCCGGAGTTACAAGGCAAACAATTTCTGCTATCGAAGCTAACAAATATTCCCCTTCATTAGAACTGGCTTTCAGAA
TTGCGCATGTGTTTGGTGTGGGTATAGAAGCAGTTTTTAGTTATGAAATTGATCCGAATTGA

Protein sequence :
MSPIKISNNIRRFRFEASEMSQASLAKAAGVTRQTISAIEANKYSPSLELAFRIAHVFGVGIEAVFSYEIDPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-09 46
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-07 44
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-07 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_2297 YP_003073745.1 Helix-turn-helix VFG2168 Protein 2e-07 44
TERTU_2297 YP_003073745.1 Helix-turn-helix VFG2175 Protein 2e-07 44