Gene Information

Name : rdgB (TERTU_0216)
Accession : YP_003071897.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Unknown
Product : non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 236012 - 236623 bp
Length : 612 bp
Strand : -
Note : identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGAATAAAACCGTAGTACTCGCCAGCGGCAACCCCGGCAAACTCCGCGAATTCCAGCAAATGTTGCAAACCTGTGGGCT
CGACGTGGTTCCGCAAGGCAACTTTGCGGTGCCGGATATTGAAGAAACGGGCCTGACCTTTGTGGAAAACGCGATCCTGA
AGGCCCGCAACGCCTGTGAACATACCGGCCACCCGGCGATCGCCGACGACTCCGGCATTGAAGTGGATGCACTCAACGGG
GCACCCGGCATTTATTCCGCGCGCTTTTCCAATGGCTGGCAGGGCGAAAATGCGTCCGACGACCGCAATAACGCCTACCT
GCTCGAGCGTTTGGCTGGTGTACCTGACGCACAGCGCACCGCGCGTTATCAGTGTGTGCTGGTGTATATGCGGCACGCGG
CGGACCCTACCCCGCTGATTTGCCAGGCAAGTTGGGAGGGGCGTATTTTGACAGCACCGCAAGGGGAAAACGGCTTCGGC
TACGATCCGTTATTTTGGTTGGACGAGCTCAACTGCACCTCAGCGCAGTTGCCGAAAGACGAAAAAAACCGCATCAGCCA
TCGCGCGAAAGCCATGGCGATGCTGTTAGCGGCATTGCAGAACGCGCGTTGA

Protein sequence :
MNKTVVLASGNPGKLREFQQMLQTCGLDVVPQGNFAVPDIEETGLTFVENAILKARNACEHTGHPAIADDSGIEVDALNG
APGIYSARFSNGWQGENASDDRNNAYLLERLAGVPDAQRTARYQCVLVYMRHAADPTPLICQASWEGRILTAPQGENGFG
YDPLFWLDELNCTSAQLPKDEKNRISHRAKAMAMLLAALQNAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 4e-24 44