Gene Information

Name : TERTU_1982 (TERTU_1982)
Accession : YP_003073467.1
Strain : Teredinibacter turnerae T7901
Genome accession: NC_012997
Putative virulence/resistance : Resistance
Product : arsenical resistance operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 2027091 - 2027444 bp
Length : 354 bp
Strand : -
Note : identified by match to protein family HMM PF01022

DNA sequence : 
TTGCTATATTCGCATATCCATATATGCAGACACCACCTAACGATGGACCCCAGTGTTTTTTTTAAATGCCTCGCTGACAA
CACCCGTCTAAAGCTTTGTTGCCTGATCTACGAAGAACAGGAACTGTGTGTGTGCGACCTGATAGCCGCCCTCAATGAGG
CCCAGCCAAAAATTTCGCGCCATCTGGCACAGCTTCGCAACTGCCGAATCCTCGTCGATGAGCGCCGCAGTCAGTGGGTG
TATTACCAAATTAATCCAGAACTTCCGGAATGGGCACGGGGCGTACTTAACAACGCCGTAGTTGCCCTCGACAAAGATCT
TGAACAGCTTAAAAAATCCCTGGCAGGCTGTTAA

Protein sequence : 
MLYSHIHICRHHLTMDPSVFFKCLADNTRLKLCCLIYEEQELCVCDLIAALNEAQPKISRHLAQLRNCRILVDERRSQWV
YYQINPELPEWARGVLNNAVVALDKDLEQLKKSLAGC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 2e-18 54
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 1e-18 54
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 2e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TERTU_1982 YP_003073467.1 arsenical resistance operon repressor BAC0594 Protein 5e-16 50
TERTU_1982 YP_003073467.1 arsenical resistance operon repressor BAC0589 Protein 9e-18 44
TERTU_1982 YP_003073467.1 arsenical resistance operon repressor BAC0591 Protein 1e-16 44
TERTU_1982 YP_003073467.1 arsenical resistance operon repressor BAC0588 Protein 2e-15 44