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Name : METDI0978 (METDI0978) Accession : YP_003066619.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Resistance Product : D-alanyl-D-alanine dipeptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2173 EC number : 3.4.13.- Position : 897735 - 898397 bp Length : 663 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 9687406, 9736537; Product type e : enzyme DNA sequence : ATGCGCGTCGCACTGACGGGCCTCGCCCTCGCCGCGTCCCAGCCGGCCGCGGCGGAAGCCGATCCCTTCGTCGATGCCGC CCGGCACGTGCCGGGGCTCGCGCTCGACATGCGCTATGCCGGCTCCGACAACTTCGTCGGCCGGCCCATCGCCGGCTACG AGGCACCGCGCTGCCTGCTCACCCCGCAGGCCGCCCGCGCGCTGGCCCGGGTGCAGGCATCGCTGGCGCCGGACGGCCTC GGCCTGAAAGTGTTCGACTGCTACCGCCCGCGCCAGGCGGTGGCCGACTTCGCCGCCTGGGCGCGCGACCCGGCCGACAC ACGCATGAAGGCGGCCTACTACCCGCGGACGGACAAGGCGGATCTGTTCCGCCTCGGCTACATCGCCGAGCGCTCGTCGC ATTCCCGCGGCTCCACCGTGGACCTGACGCTGGTGCGAAGCGCCGACGGCGCCGAACTCGACATGGGCACGCCGTTCGAC CTGTTCGACCCGGCCTCGGCGACAGATTTCCCCGGCGTCAGCCGGATCCAGTCGCGCAACCGTCATCGCCTGCGCGACGC GATGATTCGCGCCGGCTTCGTGCCCTACGCGCAGGAATGGTGGCACTTCACCCTCAAGGGCGAGCCTTACCCCGACACGG CCTTCGGCCGGCCCGTCCGCTGA Protein sequence : MRVALTGLALAASQPAAAEADPFVDAARHVPGLALDMRYAGSDNFVGRPIAGYEAPRCLLTPQAARALARVQASLAPDGL GLKVFDCYRPRQAVADFAAWARDPADTRMKAAYYPRTDKADLFRLGYIAERSSHSRGSTVDLTLVRSADGAELDMGTPFD LFDPASATDFPGVSRIQSRNRHRLRDAMIRAGFVPYAQEWWHFTLKGEPYPDTAFGRPVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanXB | YP_008394260.1 | D-alanyl-D-alanine dipeptidase | Not tested | Not named | Protein | 3e-32 | 44 |
| vanX | NP_815950.1 | D-alanyl-D-alanine dipeptidase | Not tested | Not named | Protein | 7e-33 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | U82965.2.orf32.gene. | Protein | 3e-36 | 46 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | FJ349556.1.orf5.gene | Protein | 5e-35 | 45 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | U35369.1.gene7.p01 | Protein | 4e-33 | 44 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | AF310956.2.orf6.gene | Protein | 1e-32 | 44 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | AE016830.1.gene2249. | Protein | 3e-33 | 44 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | NC_005054.2598281.p0 | Protein | 1e-36 | 43 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | M97297.gene.p01 | Protein | 1e-36 | 43 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | NC_014475.1.orf4.gen | Protein | 1e-36 | 43 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | AF130997.1.orf5.gene | Protein | 3e-31 | 43 |
| METDI0978 | YP_003066619.1 | D-alanyl-D-alanine dipeptidase | AF155139.2.orf6.gene | Protein | 4e-32 | 43 |
