Gene Information

Name : METDI0951 (METDI0951)
Accession : YP_003066592.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 866974 - 867627 bp
Length : 654 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence : 
GTGATCCGCTTCGAGAACGTCACCAAGGTCTATTCCACCTATGGTCGGCGGCGCACCATCCTCGACCGGGTGAACTTCAC
CCTGAAGCCCGGCATCAGCTACGGCATCATGGGGATCAACGGCGCTGGCAAATCGACCACCATGAAGCTCATCGCCGGCG
TCGAGGAGCCGACCCGGGGCCGCATCGTCCGGGGTCTTCGCGTCTCCTGGCCGCTCGGCTTCGCGGGCGGCTTCAACGCC
AAGATGACGGGCCGGGACAACGTCATCTTCGTCGCCCGGATCTACGGGGAGGATCCGCGGCGCGTGCTCGAATTCGTCGA
GGATTTCTCCGAACTCGGCAGCTACCTGAACATGCCGGTCAACACCTACTCGTCCGGCATGGGCTCACGCCTTGCCTTCG
GAATGAGCATGGCGATTCCCTTCGACACCTACCTCATCGACGAAACGCTCTCGGTGGGCGACGCGCGTTTCCAGAAGCGG
TGCGCCGAAGTGTTCAACAAGCGGCGCGAGACCGCGGACGTGATCCTGATCTCCCACAGCATGGAGCAGATCCGCGAATA
TTGCAGTCAGGCGCTGATCCTGATCAACGGGCAGGCGGTGGTCTACGACGATGTCGATGAGGCGATCACGGCCTACCGGC
GCCTGAATAGCTGA

Protein sequence : 
MIRFENVTKVYSTYGRRRTILDRVNFTLKPGISYGIMGINGAGKSTTMKLIAGVEEPTRGRIVRGLRVSWPLGFAGGFNA
KMTGRDNVIFVARIYGEDPRRVLEFVEDFSELGSYLNMPVNTYSSGMGSRLAFGMSMAIPFDTYLIDETLSVGDARFQKR
CAEVFNKRRETADVILISHSMEQIREYCSQALILINGQAVVYDDVDEAITAYRRLNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-48 48
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 7e-50 48
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI0951 YP_003066592.1 ATP-binding protein VFG0258 Protein 1e-48 48
METDI0951 YP_003066592.1 ATP-binding protein VFG1449 Protein 2e-50 48
METDI0951 YP_003066592.1 ATP-binding protein VFG0696 Protein 3e-49 48
METDI0951 YP_003066592.1 ATP-binding protein VFG2563 Protein 1e-44 47