Gene Information

Name : METDI0729 (METDI0729)
Accession : YP_003066418.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator in two-component regulatory system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 686064 - 686726 bp
Length : 663 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 21927389; Product type r : regulator

DNA sequence : 
ATGCGTATCCTCGTCGTCGAGGACGACCCTATCCTCTCCGACGGCCTCAGGGCCGGGCTCGGGCTGTCCGGTGCGACGGT
CGAATGCGTCGCGACATGCGCGGACGCCGATGCGGCGCTTGCGACGAGTGGTTTCGCCGCCGTGGTGCTCGACCTGATGC
TGCCCGACGGATCCGGGCTCGATGTCCTGCGCGGCCTGCGCGGGCGGGGCGACCGCACGCCGGTCGTCCTGCTGACGGCG
CGCGACGCAGTTGCGGACCGGATCGCCGGACTCGACGGCGGGGCCGACGACTACCTCGGCAAGCCCTTTGACCTCGACGA
GCTCTCGGCTCGCATTCGCGCCGTTGTCAGGCGTGCGTCGGGGCGCGCCGCGGCCTGCCTAGAGCATGCCGGCATCCGCC
TCGATCCCGCCGAGCTCGCCGTCACGCTTCACGGACGGCCGATTCCCGTGTCGCGGCGCGAGTTCATGGTGCTGGCGGCC
TTGATGGAGCGCCCGAGCGTGTTGCGCTCCAAAGGCGAGTTGGAAGAGCGCCTCTACGGCTGGCAGGAAGAAGTCGAGAG
CAACGCGGTCGAGGTGCACGTGCACAACCTGCGCGCCAAGATCGGTAAGCACACCATCGAGACGGTGCGCGGTCTCGGCT
ACCGAATGAGGGCGCCCGCATGA

Protein sequence : 
MRILVVEDDPILSDGLRAGLGLSGATVECVATCADADAALATSGFAAVVLDLMLPDGSGLDVLRGLRGRGDRTPVVLLTA
RDAVADRIAGLDGGADDYLGKPFDLDELSARIRAVVRRASGRAAACLEHAGIRLDPAELAVTLHGRPIPVSRREFMVLAA
LMERPSVLRSKGELEERLYGWQEEVESNAVEVHVHNLRAKIGKHTIETVRGLGYRMRAPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-21 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI0729 YP_003066418.1 DNA-binding response regulator in two-component regulatory system BAC0487 Protein 2e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI0729 YP_003066418.1 DNA-binding response regulator in two-component regulatory system VFG0473 Protein 1e-17 41