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Name : fliI (METDI0663) Accession : YP_003066362.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : N : Cell motility COG ID : COG1157 EC number : 3.6.3.14 Position : 628394 - 629722 bp Length : 1329 bp Strand : + Note : Evidence 2b : Function of strongly homologous gene; Product type e : enzyme DNA sequence : ATGACCCGCAACGCGATCGAGCGCCTGGAACAGGCGATGGAGGCCGGGCGCCGCGACCTGCCGCTGGTGCGGATCGCCGG CCCCGTGCGCGAGGTGACCGCCAGCGCGGCACGGGTCGCAGGCGTGTCCGCCTTCGTGCGGCTCGGCGACCGCATGGGTT TTTCCGCCGACGGCCGCACGCAGGTCGGCGAGGTGGTCCGCATCGATGCGGCCGGCGCCACGGTGAAGCCGTTCGAGAGC CGTATCGAGGCCGGCATCGGCAGCCTCGCCCACCGCATCGGCCCGGCGCAGTTGCGCCCGGACCCGCGCTGGAAGGGCCG GGTGATCGACGCGCTCGGCCGCCCCGTCGATGGGCTCGGCCCTCTGGCCGAGGGGCCCGCCAGCGTTCCGCTGGATGCCG ACCCACCCGCCGCGATGACCCGCGCACGGGTGAAGACGCCGCTGCCCACGGGGGTGCGGGCGATCGATCTGTTCACGCCG CTCTGCGCCGGCCAGCGCATCGGCATCTTCGCCGGTTCCGGCGTCGGTAAATCGACCCTACTGGCGATGCTGGCCGGCGC CCAGGGCTTCGACAGCGTGGTGGTCGCGCTGGTGGGCGAGCGCGGACGCGAGGTGCGCGAGTTCCTCGAAGGTCCCATTG CCGCCGCGCGCGACCGCGCCGTGATCGTGGTCTCGACCGGCGACGAGAGCCCGATGATGCGCCGGCAAGCGCCGAAGGTG GCACTCGCCGTGGCCGAGTCCTTCCGCGACCGCGGCGAGTCGGTGCTGCTCATCGTCGATTCCGTGACCCGCTACGCCCA CGCCGCCCGCGACGTGGCGCTCGCCGCGGGCGAGCCGGCGGTGGCGCGCGGCTACCCGCCGAGCGTCTTCTCGGACTTGC CGCGACTCCTGGAGCGCGCCGGCCCCGGCGCGGAGGGCACCGGCACGATCACCGGCATCTTCTCGGTGCTGGTCGATGGC GACGACCACAACGACCCGGTCGCCGACTCGATCCGCGGCACCCTCGACGGCCACGTGGTGCTCGACCGCGCCATCGCCGA GCAGGGCCGCTACCCGGCGATCGAGCTGCTCGGCTCGATCTCGCGCCTGGCGGGCGAGGTCTGGACCGGCGACCAGCGCG AGCTGGTGCGCAAGCTCAAGAGCATGATGGCCCGCTTCGAGGAGACACGGGATCTGCGCCTGATGGGCGGCTACCGCGCC GGCAGCGATCCCGATCTTGACCAGGCCGTCAGCCTCGTGCCGCGGATCTACGAGGCCCTGCGCCAGGAGCCGGGCCAGCC GCCGAGCCGCGACGCCTTCCTCGAACTCGCCCAATCCCTGCGGGGATGA Protein sequence : MTRNAIERLEQAMEAGRRDLPLVRIAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEVVRIDAAGATVKPFES RIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTP LCAGQRIGIFAGSGVGKSTLLAMLAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKV ALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGTGTITGIFSVLVDG DDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRA GSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQSLRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscN | AAO18044.1 | LscN | Virulence | TTSS locus | Protein | 2e-58 | 46 |
| spaI | NP_806497.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-53 | 46 |
| invC | NP_461815.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-53 | 46 |
| invC | YP_217813.1 | ATP synthase SpaL | Virulence | SPI-1 | Protein | 3e-53 | 46 |
| spaI | NP_457288.1 | secretory apparatus ATP synthase (associated with virulence) | Virulence | SPI-1 | Protein | 3e-53 | 46 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-60 | 45 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 2e-60 | 45 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 6e-61 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 6e-61 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-60 | 45 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 6e-63 | 44 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 6e-53 | 44 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 7e-53 | 44 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 1e-62 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-62 | 43 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-63 | 43 |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-64 | 43 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-64 | 43 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-62 | 43 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 4e-52 | 43 |
| escN | AFO66300.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-57 | 43 |
| escN | AFO66415.1 | putative LEE-encoded type III secretion system ATPase | Virulence | SESS LEE | Protein | 2e-57 | 43 |
| unnamed | AAL06369.1 | EscN | Virulence | LEE | Protein | 1e-56 | 43 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 8e-52 | 43 |
| ECs3730 | NP_311757.1 | ATP synthase SpaL | Not tested | LIM | Protein | 4e-50 | 43 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-62 | 42 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-62 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 1e-62 | 42 |
| invC | AAS66861.1 | InvC | Not tested | SSR-2 | Protein | 5e-52 | 42 |
| ysaN | AAS66842.1 | YsaN | Not tested | SSR-1 | Protein | 4e-48 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG0192 | Protein | 7e-59 | 48 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 8e-66 | 48 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 7e-64 | 47 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG0555 | Protein | 1e-53 | 46 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 1e-60 | 45 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG1254 | Protein | 4e-62 | 44 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 7e-65 | 41 |
| fliI | YP_003066362.1 | flagellum-specific ATP synthase | VFG1008 | Protein | 7e-49 | 41 |
