|
Name : tkt (METDI5538) Accession : YP_003070954.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 5502850 - 5504925 bp Length : 2076 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 15752350, 8396116; Product type e : enzyme DNA sequence : ATGAGCGGTGCAGACACGAGCCCGAAGGCGGCCCTGAGCCAGGGCGACAAGCTCGCGATCGACACGATCCGGACGCTCGC GATCGACGCGGTGCAGAAGGCCAATTCCGGACATGCCGGCGCACCGATGGCGCTGGCGCCCGTCGCCTACACCCTGTGGA ACCGGTATCTGCGCTACGATCCGGCCCATCCGCATTGGCCGAACCGCGACCGCTTCGTGCTCTCGGCGGGTCACGCCTCG ATGCTGCTCTACGGGCTGCTGCACTTGGCCCGCGTGGCCGAGAAGGACGGCGGCAATTCCCCCGCCATCTCGCTGGACGA CATCAAGAAATTCCGGCAGCTCGACAGCCGCACGCCGGGCCATCCGGAATACCACTTCACCACCGGCGTCGAGACCACCA CCGGGCCGCTGGGCCAGGGCGTGGCGAATTCCGTCGGCATGGCGATGGGCGGCCGCTTCAAGGGCGAGCGCATGAACCGG CCCGACCTGCCGCTGTTCGACTACAACGTCTACGCCATCTGCTCGGATGGCGACCTGATGGAGGGCGTCAGCCAGGAGGC CGCCTCGATCGCCGGGCACCTGCGCCTGTCGAACCTCTGCTGGATCTACGACAACAACACCATCACCATCGAGGGCCACA CCGAACTCGCCTTCTCGGAAGAGGTCGCCGCGCGCTTCCTCGCCTATGGCTGGCAGGTTCTGCGGGTGGCCGATGCCAAC GACACCCATGCCATCGCCTCGGCGCTCGAGACCTTCCTGCAATCGAGCGACCGCCCGACCCTGATCATCGTCAACTCGAT CATCGGCTACGGTGCACCGACCAAGCAGAACACGTCGAAGGCCCATTCCGACGCGCTCGGCCCCGACGAGGTGAAGGGCG CCAAGCGCGCCTATGGCTGGCCGGAGGATTCCGAGTTCCTCGTGCCCGACGGCGTCTACGACACCTTCGCCGACGGCATC GGCAAGCGCGGCGCCGCGCTCTACAGTCAGTGGCAGGGCTTCTTCGAGGCCGCCAAGGCGGCGGATGCGGAGCATGCCGA GGAACTGTCGGCCTTCCTCGAAGGCCGTCTGCCGGAGGGCTGGGACCGCGACATCCCGGTCTTCGAGGCCGACGCCAAGG GGCTCGCGACGCGCGAATCCTCGGGCAAGGTGCTCAACGCCATCGCCCAGCACGTGCCGTTCCTGCTCGGCGGCTCAGCC GATCTGGCGCCGTCCAACAAGTCGAACCTCACTTTCGAGGGCGCGGGCTCGCTGACCCCGTTCGAGCCGGGCGGGCGCAA CATCCATTTCGGCGTGCGTGAGCATGCCATGGGCTCGATCGTGAACGGGCTCGGGCTCGTGGGCCTGCGCGCCTACGGCG CGACCTTCCTCGTCTTCGCCGACTACATGCGCCCGCCGATCCGGCTCGCCTCGCTGATGGAGCTGCCGGTCTTCCATATC TTCACCCACGACTCGATCGGCGTGGGCGAGGACGGGCCGACCCACCAGCCGGTGGAGCAGATCCTCTCGCTGCGCTGCAT CCCCGGCCTCCTGACCCTGCGCCCGGCCGACGCCAACGAGGTGGCCGAGGCCTACCGGGTGATCTTCTCGCTGAAGGATC AGCCCGCGGTGCTGGCCCTGTCGCGCCAGCCGCTGCCGACCTTCGACCGCTCGAAATACGCCCCCGCCTCCGGCACCGCG AAGGGTGCCTACGTGCTCGCCGATAGCGAGGGAACGCCGGACGTGATCCTGATCGGAACGGGCTCCGAGGTGCAGCTCTG CGTCGGCGCCTACGAGACCCTGAAGGGCGAGGGCGTGAAGGCCCGCGTCGTCTCGATTCCGTCCTGGGAGCTGTTCGAGC GCCAGGACGAGGCCTACCGCAACAGCGTCCTGCCGCCGGAGGTTCTGGCGCGCGTGGCGGTGGAGCAGGGCAGCGTCATC GGCTGGGACCGCTACGCCGGCTCCTCGGGCTCGATCGTCGGCATGCACACCTTCGGCGCCTCGGCTCCGATCAAGGATCT GCTCGGCAAGTTCGGCTTCACCGCCGAGAAGGTGATCGAAGCGGCCCGCGCGCAGGCGGCCAAGCACAAGAAGTAG Protein sequence : MSGADTSPKAALSQGDKLAIDTIRTLAIDAVQKANSGHAGAPMALAPVAYTLWNRYLRYDPAHPHWPNRDRFVLSAGHAS MLLYGLLHLARVAEKDGGNSPAISLDDIKKFRQLDSRTPGHPEYHFTTGVETTTGPLGQGVANSVGMAMGGRFKGERMNR PDLPLFDYNVYAICSDGDLMEGVSQEAASIAGHLRLSNLCWIYDNNTITIEGHTELAFSEEVAARFLAYGWQVLRVADAN DTHAIASALETFLQSSDRPTLIIVNSIIGYGAPTKQNTSKAHSDALGPDEVKGAKRAYGWPEDSEFLVPDGVYDTFADGI GKRGAALYSQWQGFFEAAKAADAEHAEELSAFLEGRLPEGWDRDIPVFEADAKGLATRESSGKVLNAIAQHVPFLLGGSA DLAPSNKSNLTFEGAGSLTPFEPGGRNIHFGVREHAMGSIVNGLGLVGLRAYGATFLVFADYMRPPIRLASLMELPVFHI FTHDSIGVGEDGPTHQPVEQILSLRCIPGLLTLRPADANEVAEAYRVIFSLKDQPAVLALSRQPLPTFDRSKYAPASGTA KGAYVLADSEGTPDVILIGTGSEVQLCVGAYETLKGEGVKARVVSIPSWELFERQDEAYRNSVLPPEVLARVAVEQGSVI GWDRYAGSSGSIVGMHTFGASAPIKDLLGKFGFTAEKVIEAARAQAAKHKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-130 | 45 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-133 | 45 |
