Gene Information

Name : ssuB (METDI5419)
Accession : YP_003070839.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Unknown
Product : alkanesulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 5363430 - 5364191 bp
Length : 762 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 20245523, 3549459, 7984428, 99410391, 99436146; Product type t : transporter

DNA sequence :
ATGACTGGTCCCATCATCGACATCCGGGGCTTGAGCCTCGCCTACGAGCGCAACGGGCGGCGCACCGAGATCCTGTCCGC
CCTCGATCTCGCGGTGCCGCGGGGGCAGTTCCTCGTCATCGTCGGCGAATCGGGCGTCGGCAAATCGACGCTCCTGCGCG
TGCTGATCGATCTGGCCAAACCCAGCGGCGGCACGGTCCATCTCGGCACCGATCCCCAGAAAACCCGCACGCCGATGGCG
CTGGTGTTCCAGGACGCGCGGCTGCTCCCCTGGCGGCGGGTGATCGACAACGTCGCCTTCGGCCTGGAGCGGCACGGCTT
GTCGAAGCCCGAGCGCCGCGAGCGGGCGGCGGCGATGCTCAAGCTCGTCGGGTTGTCCGATCTCGCCGGCCGTTGGCCGC
ACCAGCTCTCCGGCGGCCAGCGCCAGCGCGTCGCCATCGCCCGCGCCCTCGCGGTCGAGCCCGAGGTGCTGCTGATGGAT
GAGCCGTTCTCGGCGCTCGACAGCTTCACCCGCGAGGGCCTTCAGGACGAGATCCAGCGCATCAAGGCGCAGACGGGCAA
GACGGTGCTGTTCGTGACCCACGACATCGACGAGGCGGTCTACCTCGCCGACCGGGTCGTGGTGCTGGCGGGCAGCCCCG
GCCGGATCGCGGCGGATGTCACCCTCGCGCCGCCCCGCCCGCGCCAGCGCCGGGACGCGGCCCTGGTCGAGGCGGCGCGC
CACCTGCGGGCGGAACTATCGCGGCGCTCGGCGGAACTGTGA

Protein sequence :
MTGPIIDIRGLSLAYERNGRRTEILSALDLAVPRGQFLVIVGESGVGKSTLLRVLIDLAKPSGGTVHLGTDPQKTRTPMA
LVFQDARLLPWRRVIDNVAFGLERHGLSKPERRERAAAMLKLVGLSDLAGRWPHQLSGGQRQRVAIARALAVEPEVLLMD
EPFSALDSFTREGLQDEIQRIKAQTGKTVLFVTHDIDEAVYLADRVVVLAGSPGRIAADVTLAPPRPRQRRDAALVEAAR
HLRAELSRRSAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-34 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-32 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-31 42