Gene Information

Name : recG (METDI5157)
Accession : YP_003070583.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Resistance
Product : DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 5078132 - 5080321 bp
Length : 2190 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 1544582, 1938888, 7774596, 91358318, 9380511, 94006565, 95058623, 99384345; Product type e : enzyme

DNA sequence :
ATGACCTCGGATACCAGCCAGACCGTCGGGCACCCTGCTGATGCGGCTCCTCCCCGCTCCGGCGGGGACGTCGCCCCCGG
CCTTCGCCCCAGCCTACTCGACCCGCTCTTCGCCCCCGCCCGCGGCCTGCCCGGCGTCGGGCCGAAGATCGCGCCGCTCA
TCGAAAAGCTGCTCGGCTCCGAGGAGCGGCCGGCCCGCGTCGCCGACCTGCTGTTCCACCTGCCCCAAAGCGGGGTCGCC
CGGCCGCTCTGCGGCTCGATTCGCGATGCGCCGACGGGCGAGCCCGTCACGCTGGGCGTCACTGTGGTGGCCCACCGGCC
GCCGATGCTCGGCAAGCGGGCCTTCCGCGTGCTGGTCGAGGACGGGACTGGCGACATCAGCCTTGTCTTCTTCGGCATGC
CGCGGGGCCGCATCGAGAAGATGCTGCCGCTCGGCAGTCACCGCTACGTCTCAGGGAGGATCGACCTGTGGGACGGCACG
CGGCAGATGGTGCATCCCTCGCGCATCCTCGACCAGGAGGGGTTGGCCAGCCTGCCCGCCGTCGAGCCGATCTACGGCGC
GACCGAGGGGCTGACCTCGCGGGTCATCAGCCGGATCGTCCACGGCGCGCTGGACCGGCTTCCCGTCCTGCCCGAGTGGC
AGGACGCGTCCTATCTCGCCCGCAACCGTTTTCCCCCCTTCGCCGAGGCTCTGCGCATCGAGCACCGGCCGGAGGAGGCG
CCCCCGCCCCCGGTCGAGGGACAGGCGCCGCCTGCGAGCCCCGCGCGCAAGCGCCTCGCCTACGACGAGCTGCTCGCCTC
GCAGCTCGCGCTCGCCCTGGTGCGCGCCCGGCAGCGGCGGAAGCCCGGCCGGGTCAATGCCGGCGACGGGCACCTGAAAG
AGCGCGTCGAGGCCGCCCTGCCCTTCGCGCTGACCGGCGCGCAGGCGCGGGCGGTCGAAGAAATCCGCGCCGACATGGCC
GCCGAGCGGCGGATGCTGCGCCTGCTCCAGGGCGATGTCGGCTCCGGCAAGACGGCGGTGGCGTTGCTCGCGATGGCCTC
GGCGGTGGAGGCCGGGCGGCAGGCCGCCCTGATGGCGCCGACCGAGATTCTGGCGCGCCAGCATTACGAGCGACTGGTGC
CGCTGGCCGGCGCCATGCGCCTGCGGCTGCTGACCGGCCGCGACCGGGCCGCCGAGCGGCGGGCGACGCTGGCGGATCTC
GCGGCGGGCGAGATCGACATCGTGGTCGGCACCCACGCTCTGTTCCAGGAGTCGGTCGCGTTCCGCGATCTCGGCCTCGC
GGTGGTGGACGAGCAGCACCGCTTCGGCGTGCACCAGCGCCTCGCGCTCGGCGCCAAGGGCGAGGCGGTGGACATCCTCG
TGATGACCGCCACCCCGATCCCGCGCACGCTGGCACTCACCTTCTTCGGCGACATGGACGTCTCGGTGCTCGACGAGAAG
CCGGCCGGGCGCCAGCCGATCAAGACCATCACCGTGCCGGTGGAGCGCATCGACGAGGTGGTGGGCGGCCTGCACCGGGC
TCTGGCCGCGGGCGACCGGGTCTACTGGATCTGCCCGCTGGTCGCCGAATCGGAATATGTCGATCTCGCCGCCGCCGCCG
AGCGGTTCGAGGATCTGCAGAAGCATTTCGGCGACGCGGTCGGCCTGATCCACGGCAAGATGCCGGGGCCGGAGAAGGAC
GCGGCGATGGAGGCCTTCGCCGCCGGCCGCACCCGCGTGCTGGTCTCGACCACCGTCGTGGAGGTCGGCGTCGATGTGCC
GGAGGCCACCATCATGGTGATCGAGCACGCCGAGCGCTTCGGACTGGCCCAGCTCCACCAGCTCCGCGGCCGGGTCGGGC
GCGGCTCGAAGGCCTCCTCCTGCCTGCTGCTCTATCGCGGGCCCCTCGGCCAGGTCGCCAAGGCGCGCCTGGAGATGATG
CGCTCGAGCGAGGACGGTTTTCGCATCGCCGAGGAAGACCTGCGCCTGCGCGGCGAGGGCGAGGTACTCGGCACCCGCCA
ATCCGGCGCCGCCGCCTTCCGCCTCGCCCGGCTCGAGACCGACGGCGACCTGCTGGAGGCTGCCCGCGACGACGCGCGGC
TGATCGTGGAGCGCGACCCGCGCCTCGCGAGCGAGCGCGGCCGGGCGCTTAGGGTGCTGCTCTACCTGTTCGAGCGCGAA
GCGGCGATCCGGCTGATCGGGGCGGGCTGA

Protein sequence :
MTSDTSQTVGHPADAAPPRSGGDVAPGLRPSLLDPLFAPARGLPGVGPKIAPLIEKLLGSEERPARVADLLFHLPQSGVA
RPLCGSIRDAPTGEPVTLGVTVVAHRPPMLGKRAFRVLVEDGTGDISLVFFGMPRGRIEKMLPLGSHRYVSGRIDLWDGT
RQMVHPSRILDQEGLASLPAVEPIYGATEGLTSRVISRIVHGALDRLPVLPEWQDASYLARNRFPPFAEALRIEHRPEEA
PPPPVEGQAPPASPARKRLAYDELLASQLALALVRARQRRKPGRVNAGDGHLKERVEAALPFALTGAQARAVEEIRADMA
AERRMLRLLQGDVGSGKTAVALLAMASAVEAGRQAALMAPTEILARQHYERLVPLAGAMRLRLLTGRDRAAERRATLADL
AAGEIDIVVGTHALFQESVAFRDLGLAVVDEQHRFGVHQRLALGAKGEAVDILVMTATPIPRTLALTFFGDMDVSVLDEK
PAGRQPIKTITVPVERIDEVVGGLHRALAAGDRVYWICPLVAESEYVDLAAAAERFEDLQKHFGDAVGLIHGKMPGPEKD
AAMEAFAAGRTRVLVSTTVVEVGVDVPEATIMVIEHAERFGLAQLHQLRGRVGRGSKASSCLLLYRGPLGQVAKARLEMM
RSSEDGFRIAEEDLRLRGEGEVLGTRQSGAAAFRLARLETDGDLLEAARDDARLIVERDPRLASERGRALRVLLYLFERE
AAIRLIGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-156 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_003070583.1 DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration BAC0356 Protein 1e-91 43