Gene Information

Name : METDI4987 (METDI4987)
Accession : YP_003070415.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 4884380 - 4885072 bp
Length : 693 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of amino acid motif, structural feature or limited homology; Product type pt : transporter

DNA sequence : 
ATGTCGAACAAGGCCGTCTCTCTGTCGCAGATCGAGCTGAGCCTCGGCCGCGGCCCCGCGCGGGTGCATGTCCTGCGCGG
CATCTCGCTCGATGTCGAGCGCGGCGAGGCGGTCGGACTCGTCGGCCCGTCGGGTTCGGGAAAATCGACCCTGCTCACCG
TCATGGCCGGGCTGGAGCGGCCCGATACCGGCCGCGTCACCATCGCCGGCACGGATCTCGGCGGGCTCGATGAGGACGGG
CTCGCGCGCTTCCGCGGCCGCAACATCGGCATCGTGTTCCAGGCCTTCCACCTCGTGCCGACCATGACCGCGCTGGAGAA
CGTGGCGCTGCCGCTCGAACTCGCCAACGCATCCGATCCGCATGGACGGGCGGCGGCGGAACTGGAGGCGGTGGGGCTCG
GCCACCGGCTGCGGCACTACCCGGCGCAGCTCTCCGGCGGCGAGCAGCAGCGCGTGGCGATCGCCCGTGCGCTCGCGCCC
GATCCGGCGATCCTGGTCGCCGACGAGCCGACGGGAAACCTCGACGAGGCGACGGGGAGGCAGATCGTGGACCTGTTGTT
CGGGCTCAAGCGCGACCGCGGCGCGACCCTGGTCCTGGTGACGCACGATCCCGGCCTCGCCCGGCTGTGCGACCGCACCG
TACGCCTACGCGCCGGCCGGATCGAAGCGGCGGCGGAGGCGCAAGAAGCCTAA

Protein sequence : 
MSNKAVSLSQIELSLGRGPARVHVLRGISLDVERGEAVGLVGPSGSGKSTLLTVMAGLERPDTGRVTIAGTDLGGLDEDG
LARFRGRNIGIVFQAFHLVPTMTALENVALPLELANASDPHGRAAAELEAVGLGHRLRHYPAQLSGGEQQRVAIARALAP
DPAILVADEPTGNLDEATGRQIVDLLFGLKRDRGATLVLVTHDPGLARLCDRTVRLRAGRIEAAAEAQEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-21 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI4987 YP_003070415.1 ABC transporter ATPase NC_008702.1.4606598. Protein 6e-35 48
METDI4987 YP_003070415.1 ABC transporter ATPase NC_012469.1.7686878. Protein 4e-38 45
METDI4987 YP_003070415.1 ABC transporter ATPase CP001581.1.gene598.p Protein 3e-38 44
METDI4987 YP_003070415.1 ABC transporter ATPase CP001581.1.gene798.p Protein 1e-34 43
METDI4987 YP_003070415.1 ABC transporter ATPase NC_012469.1.7685735. Protein 3e-38 42