Gene Information

Name : METDI4746 (METDI4746)
Accession : YP_003070189.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 4641261 - 4642274 bp
Length : 1014 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence : 
TTGATGGCAACGATCCGTAAGAGAGGTTCTTCCTGGCAGGCCCAAGTGCGCCGCCAAGGCTCCTCACCGATCTCCAAAAG
CTTCACCACCAAGGCCGATGCCCTCCTGTGGGCACGGGAGACAGAGCGCTCCATTGATAGGGCGGAGCTGCCGGTCACCA
TCAAAGACCTTCAGCGAATCACTGTGGCCGATTTGCTAGCCCGGTATGAGGCTGAGGTCACAACGAAGAAGCGAGGGGCA
GACCGAGAGCGGTACAAGCTCAGGGTCATCCGGTCCCACCCCCTCACAAGCCTCTCCCTAGCCAAGCTCACAGCGGTGGC
GGTGTCTCGGTATCGGGATGATCGTCTGAAGGTCGTCCAAGGCGCCACCGTCAGGCGAGAGCTGGCCATCCTTCAGCACT
GCTTCGAGGTCGCACGGAAGGAGTGGGGCACACCGCTGCCTACCAACCCCGTCCACGGCATCACCCTTCCTGAACCGTCC
AGAGCCCGTGAGCAGCGGCTTGAGGCAGAGGCAGGACAGAAGCTCCATGCCGCCATCGGCTCCGTCCATGCGTGGTACCT
CAGACCCCTGATGGAACTGGCCATCGAGACAGGGATGCGGCGGGGTGAGTTGCTGTCCCTTCAGTGGCGCCATGTCAGCC
TGGGGAAGCGAACGGCTCACCTCCCGATCACCAAGAACGGCCATGCTCGGACGGTGGCACTCACTCCCAAAGCCATCGAG
ATCCTGAAGGCGCTCCCTCAGACAGATGCACGTGTTCTGCCGGTGAGCGGGAATGCTGTCCGCCTCGCTTGGGAACGGCT
CAGGAAGAGGGCAGGGCTGCCGGGCCTACGGTTTCACGATTTGCGACACGAGGCAGTCAGTCGGTTCTTTGAGGCTGGCC
TGAGCATCCCAGAGGTGGCGCTGATGAGTGGGCACCGGGATACACGGATGTTGATGAGGTACACCCACCTCAGGCCGGAA
GCGTTGGCTGAGCAGCTGGCCAAGGTGGCGCAAGAAGAAGTTATCGCCAATTAA

Protein sequence : 
MMATIRKRGSSWQAQVRRQGSSPISKSFTTKADALLWARETERSIDRAELPVTIKDLQRITVADLLARYEAEVTTKKRGA
DRERYKLRVIRSHPLTSLSLAKLTAVAVSRYRDDRLKVVQGATVRRELAILQHCFEVARKEWGTPLPTNPVHGITLPEPS
RAREQRLEAEAGQKLHAAIGSVHAWYLRPLMELAIETGMRRGELLSLQWRHVSLGKRTAHLPITKNGHARTVALTPKAIE
ILKALPQTDARVLPVSGNAVRLAWERLRKRAGLPGLRFHDLRHEAVSRFFEAGLSIPEVALMSGHRDTRMLMRYTHLRPE
ALAEQLAKVAQEEVIAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rci NP_807850.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 2e-44 41
rci AAC38070.2 Rci Not tested SPI-7 Protein 1e-44 41
rci NP_458640.1 shufflon-specific DNA recombinase Not tested SPI-7 Protein 2e-44 41