Gene Information

Name : fixJ (METDI4561)
Accession : YP_003070008.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4446674 - 4447282 bp
Length : 609 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 12597275, 2000090; Product type r : regulator

DNA sequence : 
ATGGCACATAGCCTCGTGCACGTCGTCGACGACGATCCGGCGATGCGGGATTCGGTCGGCTTCCTGCTCGACACCGCAGG
CTTCGAGGTCGCGCTCTACCGGGGAGGGACAAATCTCCTTGCCACACTGCCGAGGCCGGCCCGGGGCGCCGTCCTAACTG
ACATCCGCATGCCCGGCATCGACGGTCTGGAACTGCTGCGCCGCCTGCGAGCGGGCGGCCACACGCTTCCCGTGGTGGTG
ATGACAGGACACGGTGACGTGCCGCTCGCGGTCGAGGCGATGAAGCTCGGGGCCTGCGACTTTATCGAGAAGCCCTTCAA
CGACGAGGCGTTGCTGCAGGCGCTACGTTCCGCCCTGGATCGAGCCGGACCGGCCGAGGCAGCCGACCCCAGCCTACAGG
AATTCATCCGGCGGGTGGGGACCTTAAGCCACCGCGAGCGGCAGGTCCTCGACCAACTGGTCGCGGGAGGCACCAGCAAG
GAGATCGGACGCGCACTCGACCTCAGTCCGCGCACCGTCGAGATCTACCGGGCAAAGCTCATGGCGAAGACGCAGGCGAC
CGGCTTGCAGGAACTGGTGCGCTGGGCAGTGCTGGCCGGCCTGGCCTGA

Protein sequence : 
MAHSLVHVVDDDPAMRDSVGFLLDTAGFEVALYRGGTNLLATLPRPARGAVLTDIRMPGIDGLELLRRLRAGGHTLPVVV
MTGHGDVPLAVEAMKLGACDFIEKPFNDEALLQALRSALDRAGPAEAADPSLQEFIRRVGTLSHRERQVLDQLVAGGTSK
EIGRALDLSPRTVEIYRAKLMAKTQATGLQELVRWAVLAGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 8e-26 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 8e-26 42
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 6e-26 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 8e-26 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 9e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_003070008.1 two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ VFG0488 Protein 2e-26 42