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Name : umuC (METDI4328) Accession : YP_003069796.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit C Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 4265341 - 4266672 bp Length : 1332 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 2989816, 2989817; Product type e : enzyme DNA sequence : ATGAGCACCACCGAGGCCCGCCGGCGCGACCGGATCGGTGGTGGCCGCGCACTCGCATTGATCGACGGCAACAGCTTCTA CTGCTCCTGCGAGCGCGTGTTCGACGCCAAGCTCGCCCGCGTGCCGGTGATCGTGCTGAGCAACAACGATGGATGCGCCA TCGCCCGCACCCCCGAGGCCAAAGCGCTCGGGATCAAGATGGGCGACCCCTACTTCAAGATCCGTGGGTTCTGCGAGCGC CAAGGCGTGCGCGTGTTCTCCTCGAACTACACCCTCTATGGGGACATGTCGGCGCGCATCAACGCGATCTATCGCGACGC CACGCCCGACGTGGAGGTCTACTCGATCGACGAGAGCTTCCTCGACCTGACCGCCTTCGTGCGCCGGGATCGCGTCGCGC TCGCCCGAGACATCCGCGCCACCGTGCGGGCCTGGACCGGCATCCCGACCTGCGTCGGCATCGGCCCGACCAAGACGCTC GCCAAGCTCGCCAACCATATCGCCAAGACGGTGCCTGAGCTCGACGGCGTGTGCGACCTGACCGAGCCGGTCGCCTACGA GCACTGGCTCTGCCGCATCCATGTCGGCGAGCTCTGGGGCGTGGGCCGCGCCTCGCTGCCGAAGCTGGAGGCGCTAGGCA TCGATACGGTGGCGGACCTGCGCGACATCGACCCGCGCCCGGTGCGCGAGGCGCTGACGGTGGTGGGTGAGCGCATGATT CACGAGCTGCGCGGCGTGTCCTGTCTCGGGCTCGAACTCGTGCCGGCCCGGCGCAAGGGCTGCGCGGTGACGCGCTCGTT CTCCGGCCGGGTGACGGAGCGGGCCGAACTGGAGCAGGCCGTGGCTGCCCACGCGACGCGGCTCGGCGAGAAGCTGCGGC GGGAAGGGCTCGGCACCGACCACATCACCGTTTTCTACCATACGAGCGAACACGACCGCGGCGAGCCGATGCGCTCGGCC TCGACGGTGGTGACGCTGCCGGAGGCGACCAACGACACGCTGACGCTGATCCCGGCGGCGCTGCATGGCGTGGCGCGCAC CTGGCGTGAGCAGGGCAACCCGCCCTGGCGCTACTCGAAGGCAGGGGTGGTGACAGTGGATCTCGTGCCGCTCGCTGCCT CGCAGCGGGCGTTGATCGGTCGGCTCGACCGCGAAAGAGCTGGCCGCCTCATGGGTGCGCTGCACGCCTGCAACGCCCGC TTCGGCCGCGGCAGCGTCGTGCCGGCGCGGGCCGGACTGGCGCAGCAGCGGCGGACTTGGACAACGAAGTTCGAGATGCG CACGCCGCGCTACACGACACGGGTCGACGAGCTACCCGTCGCGCACGCTTGA Protein sequence : MSTTEARRRDRIGGGRALALIDGNSFYCSCERVFDAKLARVPVIVLSNNDGCAIARTPEAKALGIKMGDPYFKIRGFCER QGVRVFSSNYTLYGDMSARINAIYRDATPDVEVYSIDESFLDLTAFVRRDRVALARDIRATVRAWTGIPTCVGIGPTKTL AKLANHIAKTVPELDGVCDLTEPVAYEHWLCRIHVGELWGVGRASLPKLEALGIDTVADLRDIDPRPVREALTVVGERMI HELRGVSCLGLELVPARRKGCAVTRSFSGRVTERAELEQAVAAHATRLGEKLRREGLGTDHITVFYHTSEHDRGEPMRSA STVVTLPEATNDTLTLIPAALHGVARTWREQGNPPWRYSKAGVVTVDLVPLAASQRALIGRLDRERAGRLMGALHACNAR FGRGSVVPARAGLAQQRRTWTTKFEMRTPRYTTRVDELPVAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 2e-65 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 6e-56 | 42 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 6e-56 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-44 | 41 |
