Gene Information

Name : fixJ (METDI4312)
Accession : YP_003069782.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4249347 - 4249955 bp
Length : 609 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGGCTCCTGCCCTCGTGCATGTCATCGACGACGACCCCGCCATGCGCGACTCGGTCGCCTTCCTTCTCGATACGGCCGG
CTTCGACGTGCGGCTCTACGAGGCGGGAACGGCCCTGCTGGCGCGGCTCACGCGGCCGCTCCGAGGGTGCATCCTGACCG
ATATCCGCATGCCCGACCTCGACGGGTTGGCCCTGTTCCGCTCCCTCCGCTCGGCCGGTCACACGCTTCCCATCGTGATG
ATGACGGGGCATGGCGACGTGCCGCTCGCGGTGGAGGCGATGAAGCTCGGGGCCTGCGACTTCATCGAGAAGCCGTTCGA
TGGCGAGGCGCTCCTCCGGGCGCTGCAGGCCGCCCTGGAGCAGGGTGGGTCTAACGGCTCGGTCGACCCAATCCTGCAGG
ACTTCATGCGGCGGTTGGCGACCTTGAGCGAGCGCGAGCGCCAGGTTCTCGATCATCTGGTGACCGGGGGCACCAGCAAG
GAGATCGGGCGAAGGCTCCGGATCAGCCCGCGGACCGTCGAGATCTACCGGGCCAAGGTCATGGCCAAGACGCGGGCGGG
AAGCCTGCAGGAACTGGTCCGCTGGGCCGTGCTCGCCGGCTTCGTGTGA

Protein sequence : 
MAPALVHVIDDDPAMRDSVAFLLDTAGFDVRLYEAGTALLARLTRPLRGCILTDIRMPDLDGLALFRSLRSAGHTLPIVM
MTGHGDVPLAVEAMKLGACDFIEKPFDGEALLRALQAALEQGGSNGSVDPILQDFMRRLATLSERERQVLDHLVTGGTSK
EIGRRLRISPRTVEIYRAKVMAKTRAGSLQELVRWAVLAGFV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 6e-22 41
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 6e-22 41
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 6e-22 41
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 4e-22 41
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 7e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fixJ YP_003069782.1 two component LuxR family transcriptional regulator; nitrogen fixation transcriptional regulator FixJ VFG0488 Protein 2e-22 41