Gene Information

Name : METDI0338 (METDI0338)
Accession : YP_003066061.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator in two-component regulatory system
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 323068 - 323730 bp
Length : 663 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGCGCATCCTCGTCGTCGAGGACGACCCCATCCTCTCGGACGGCCTCAGGGCCGGGCTCGGGCTGTCCGGCGCGACCGT
CGAGTGCGTCGCGACCTGCGCGGACGCCGATGCCGCCCTCGCCGCAAGCGGCTTCGGCGCCGTGGTGCTCGACCTGATGC
TGCCCGACGGCTCCGGGCTCGACGTGCTGCGTGGGCTGCGCGAGCGGGGCGACCGCACGCCGGTGGTCCTCCTCACGGCG
CGGGATGCCGTGGCGGACCGGATCGCAGGGCTCGACGGCGGGGCCGACGATTACCTCGGCAAGCCATTCGACCTCGACGA
GCTCGCGGCCCGCATCCGCGCCGTCGTCCGGCGGGCGTCAGGGCGGGCCTCGGCCTGCCTGGAGCATGCCGGCATCCGCC
TCGACCCGGCCGAGCTTACCGTCACGCTCCATGGGGAACCGGTCCCGGTGTCGCGGCGCGAGTTCATGGTGCTGACGGCG
CTGATGGAACGGCCGAACGTGCTGCGCTCGAAGGCGGAGCTGGAGGAGCGCCTCTACGGCTGGCAAGAGGAGGTCGAGAG
CAACACGGTCGAGGTGCACGTGCATAACCTGCGCGCCAAGATCGGCAAGCATGCCATCGAGACGGTGCGCGGCCTCGGCT
ACCGCATGAGGGCAACCGCATGA

Protein sequence : 
MRILVVEDDPILSDGLRAGLGLSGATVECVATCADADAALAASGFGAVVLDLMLPDGSGLDVLRGLRERGDRTPVVLLTA
RDAVADRIAGLDGGADDYLGKPFDLDELAARIRAVVRRASGRASACLEHAGIRLDPAELTVTLHGEPVPVSRREFMVLTA
LMERPNVLRSKAELEERLYGWQEEVESNTVEVHVHNLRAKIGKHAIETVRGLGYRMRATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-24 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI0338 YP_003066061.1 DNA-binding response regulator in two-component regulatory system BAC0487 Protein 3e-22 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
METDI0338 YP_003066061.1 DNA-binding response regulator in two-component regulatory system VFG0473 Protein 1e-21 41