Gene Information

Name : actP (METDI3297)
Accession : YP_003068802.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Resistance
Product : cation/acetate symporter actP; acetate and glycolate permease
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 3228514 - 3230199 bp
Length : 1686 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 14563880; Product type t : transporter

DNA sequence :
ATGATCCGCCTCGTCCCCCTTCTCGGCGCCGCCCTTCTCGGCGCGACCCCGGCGCTCGCAGCCGGGCCGGATCTCGGCGC
CGTGCAGCAGCAGGCCACGAACTGGCCTGCGATCTTCATGTTCCTGTTCTTCGTCCTGTTCACCCTCGGCATCACCTACC
GGGCGGCGAAGGGTTCGAAGTCGGCGGCCGACTTCTACGCGGCCGGCGGCGGCATCTCGGCGCGCACGAACGCCCTGGCG
ATCGCCGGCGACTACATGTCGGCGGCATCCTTCCTCGGCATCTCGGGGCTCGTCTATTCCTCGGGCTTTGACGGCCTGAT
CTACTCGACGGGCTTCCTCGTCGGCTGGCCGATCGTGCTGTTCCTGATCGCCGAGCGTCTGCGCAACCTCGGCAAGTTCA
CCTTCGCCGACGTGGCGAGCTTCCGCCTCGACCAGACCTCGATCCGCATCATCTCGGCGACCGGCACCCTCGTCGTGGTG
GCGTTCTACCTGATCGCGCAGATGGTCGGCGCGGGGAAGCTGATCCAGCTCCTGTTCGGCCTGCCCTACCTCTACGCGGT
GGTGATCGTCGGCGCGCTGATGATCATCTACGTCGCCTTCGGCGGCATGAAGGCGACGACCTGGGTGCAGGTCATCAAGG
CCTGCCTGCTGCTCGGCGGCGCGACCTTCATGGCCGGCGCCGTACTCTACAAGTACGGCTTCAGCCCGGAAAAGCTGTTC
GCGACCGCCGTGCAGACCCATCCGAAGGGCGACGCCATCATGGCGCCCGGCGGCCTCGTCTCGAACCCGATCGACTCGCT
CTCGCTCGGCGTGGGCCTGATGTTCGGCACCGCGGGCCTGCCGCACATCCTGATGCGCTTCTTCACGGTGTCGGACGCCC
AGGCCGCGCGTAAGTCGGTGTTCTACGCCACCGGCCTGATCGGCTACTTCTACATCCTCACCTTCATCATCGGCTTCGGC
GGCATCGCCCTGCTGATGTCAGACCCGAGCTACTTCAAGCTCGGCGCAGACGGCACGACCTACGACAAGATCAAGGACAT
GGTCGGCGGCACCAACATGGTGGCCGTGAACCTCGCCAACGCGGTGGGTGGGCCGTACTTCCTCGGGTTCATCTCGGCGG
TGGCCTTCGCGACGATCCTCGCGGTGGTGGCGGGCCTGACGCTCGCCGGCGCCTCGGCGATCAGCCACGACCTCTACGCG
CAGGTCTTCGCCCGCGGGCGGACCACGGAGCGGGCGGAGGTGAACCTCTCCAAGGCCTCCGCCGTCGGCATCGGCATCGT
GGCGATCTATCTCGGCTACGTGTTCGAGAACCAGAACGTCGCCTTCATGGTCGGGCTCGCCTTCTCCGTGGCGGCGAGCT
GCAACTTTCCCGTCCTGGCCATGTCGATCCTCTGGCGCGGCACCACGACCTGGGGCGCGCTCATCGGCGGCCTCGTCGGA
CTCCTGGCGGCGGTGGTCATGGTGGTGCTGTCCGATGCGGTCTGGGTGAAGACCTTCGGTCATCCGGCGGCCCTGTTCCC
CTACGCGAACCCAGCCCTGTTCTCGATGCCGCTGGCCTTCGTGACGATTTGGGCGGTCTCGAAGATCGACAGGACCCGTC
GAGCCGACCGCGAGCGGGCCGCGTTCGACGCCCAGTTCGTGCGTTCGGAGACCGGCATCGGAGCCTCGGGCGCCCACGCG
CACTGA

Protein sequence :
MIRLVPLLGAALLGATPALAAGPDLGAVQQQATNWPAIFMFLFFVLFTLGITYRAAKGSKSAADFYAAGGGISARTNALA
IAGDYMSAASFLGISGLVYSSGFDGLIYSTGFLVGWPIVLFLIAERLRNLGKFTFADVASFRLDQTSIRIISATGTLVVV
AFYLIAQMVGAGKLIQLLFGLPYLYAVVIVGALMIIYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLYKYGFSPEKLF
ATAVQTHPKGDAIMAPGGLVSNPIDSLSLGVGLMFGTAGLPHILMRFFTVSDAQAARKSVFYATGLIGYFYILTFIIGFG
GIALLMSDPSYFKLGADGTTYDKIKDMVGGTNMVAVNLANAVGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYA
QVFARGRTTERAEVNLSKASAVGIGIVAIYLGYVFENQNVAFMVGLAFSVAASCNFPVLAMSILWRGTTTWGALIGGLVG
LLAAVVMVVLSDAVWVKTFGHPAALFPYANPALFSMPLAFVTIWAVSKIDRTRRADRERAAFDAQFVRSETGIGASGAHA
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 8e-115 58
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-66 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
actP YP_003068802.1 cation/acetate symporter actP; acetate and glycolate permease BAC0564 Protein 4e-137 66
actP YP_003068802.1 cation/acetate symporter actP; acetate and glycolate permease BAC0570 Protein 3e-129 61