Gene Information

Name : glnA (METDI2616)
Accession : YP_003068149.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2525900 - 2527309 bp
Length : 1410 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2882477; Product type e : enzyme

DNA sequence :
ATGAAAACCGCTGAAGACGTGCTCAAGGCAATCAAAGACAACGACATCAAATACGTCGATCTCCGCTTCACGGACCCGCG
GGGAAAATGGCAGCACGTCACTTTTGACGTGTCGCTGGTGGACGAGGAGATGTTCACGGACGGCACGATGTTCGACGGCT
CGTCAATCGCGGGTTGGAAAGCAATCAACGAGTCCGACATGACGCTCATGCCGGATGCCTCGACAGCGGCTACCGATCCA
TTTTTTGCCGCCTCGACATTGTCTGTTGTATGCGACGTGCTCGAACCGACAACCGGCGAGCCCTATGGCCGAGACCCGCG
CGGTATTGCCAAGAAGGCAGAGGCCTATCTCCGAGCAACCGGAATTGGTGATGCGGTTTACGTCGGTCCCGAAGCGGAGT
TTTTCGTGTTCGACGACGTGCGTTTTGCGGCGGATCCCTACAACACGGGCTTTGTGCTGGACGCGGCTGAACTTCCGATC
AATTCCCACAAGGAATACGAGAATGGGAATCTCGGCCACCGTATCGCGACGAAAGCAGGTTATTTTCCCGCGCCCCCGCA
GGACCCGGCGCAAGACTTGCGATCCGAAATGCTCGCAATGATGGCCCAGATGGGTGTCAAGGTCGAAAAGCACCATCATG
AGGTTGCGTCGGCACAACACGAACTCGGAACCAAATTCGGTTCGCTGACGACGATGGCCGATCACATGCAGATTCAAAAG
TACTGCGTGCACCAGGTTGCAGAACGATGGGGCAAGACCGCCACCTTCATGCCGAAGCCTGTCTATGGCGATAATGGGAG
CGGCATGCATGTTCATCAATCGATCTGGAAGAGCGGCAAACCGGTGTTTGCCGGATCGCTCTATGCCGACCTGTCACAGG
AATGCCTCTGGTACATCGGTGGCATCATCAAACATGCCAAGGCCGTGAACGCCTTCACGAACCCAACGACGAACAGCTAC
AAGCGGTTGGTCCCCGGCTTCGAGGCACCCGTGTTGCTGGCATATTCGGCGCGAAATCGCTCCGCCTCTTGCCGCATCCC
CTATGCTACCAACCCCAAGGCAAAGCGGGTTGAAGTGCGATTCCCCGACCCAGCGGCGAATCCTTATCTCGGCTTTGCCG
CGATGCTCATGGCGGGACTGGATGGAATCGCCAACAAGATCGATCCGGGTCCGGCGATGGATAAGGATCTCTATGATTTG
CCACGGCGGGAGTTGCAAAACATTCCGACCGTCAGTGCGTCGCTTCGCGAGGCGCTCTCCCATCTCGATCGAGATCGGAC
ATTCCTGAAGTCCGGTGGAGTTTTCACCGACGATTTCATCAATGCCTATATCGAACTCAAGATGCAGGAAGTCGTGCGCT
TCGAAATGACGCCGCATCCTGTCGAATTCGAGATGTACTATTCCAGTTGA

Protein sequence :
MKTAEDVLKAIKDNDIKYVDLRFTDPRGKWQHVTFDVSLVDEEMFTDGTMFDGSSIAGWKAINESDMTLMPDASTAATDP
FFAASTLSVVCDVLEPTTGEPYGRDPRGIAKKAEAYLRATGIGDAVYVGPEAEFFVFDDVRFAADPYNTGFVLDAAELPI
NSHKEYENGNLGHRIATKAGYFPAPPQDPAQDLRSEMLAMMAQMGVKVEKHHHEVASAQHELGTKFGSLTTMADHMQIQK
YCVHQVAERWGKTATFMPKPVYGDNGSGMHVHQSIWKSGKPVFAGSLYADLSQECLWYIGGIIKHAKAVNAFTNPTTNSY
KRLVPGFEAPVLLAYSARNRSASCRIPYATNPKAKRVEVRFPDPAANPYLGFAAMLMAGLDGIANKIDPGPAMDKDLYDL
PRRELQNIPTVSASLREALSHLDRDRTFLKSGGVFTDDFINAYIELKMQEVVRFEMTPHPVEFEMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 6e-97 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_003068149.1 glutamine synthetase, type I VFG1399 Protein 4e-94 50