Gene Information

Name : METDI2407 (METDI2407)
Accession : YP_003067950.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Unknown
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 2328454 - 2329308 bp
Length : 855 bp
Strand : -
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGTCGCGTGCCGGCGCCCTCGCCCTCAAACAGCCGCCCGAATTCGAGCAACCGGCGCCCCGCGCGGTGCCGGCGGCGCC
CGTCATCGCCGCGCGCGGACTGTCCCTGACCTACACCACCGCCGACGGGCCGGTTCACGCGCTTTCCGATGTCGATCTCG
CGGTGGCGCCGGGCGAGTTCGTCTCCTTCATCGGCCCGTCCGGCTGCGGCAAGACCACGCTGCTGCGCTGCGTCGCCGAT
CTCGAACAGCCGACCGGTGGCGAACTCACCGTCAACGGCGTCGGCGCCGAGGCGGCGCGGCTGCGGCGCGACTACGGCTT
CGTGTTCCAGGCGCCGGCGCTCTATCCCTGGCGGACCATCGCGCGCAACGTCGCCCTGCCGCTCGAGATCTTCGGCGTAC
CGCGCGCCGAGCGGCGGGAGCGCGTGGCGCACTTCCTCGACCTCGTCCAGCTCACCGGCTTTGCCAACAAGTTCCCCTGG
CAGCTCTCCGGCGGCATGCAGCAGCGGGCCTCGATCGCCCGCGCCCTCTGCTTCGATCCGAAGCTGCTTTTGATGGACGA
GCCCTTCGGGGCGCTGGACGAGATCGTGCGCGACCACCTCAACGCGCAGCTCCTCGCGCTGTGGCGCAAGACCGCCAAGA
CGGTCCTGTTCGTCACCCACTCGATCCCCGAGGCGGTCTACCTCTCGACCCGCGTCGTGGTGATGTCGCCGCGCCCGGGG
CGGATCATCGACATCGTCGATTGCACCGCGCTCGGGCGGGAGCGTCCGCTGGAGATCCGCGAGACGCCCGAGTTCCTGCG
CCTCGGCCAGCGGGTGCGCGAGGGGCTGCGCGCCGGTCATGCCTATGACGCGTAA

Protein sequence :
MSRAGALALKQPPEFEQPAPRAVPAAPVIAARGLSLTYTTADGPVHALSDVDLAVAPGEFVSFIGPSGCGKTTLLRCVAD
LEQPTGGELTVNGVGAEAARLRRDYGFVFQAPALYPWRTIARNVALPLEIFGVPRAERRERVAHFLDLVQLTGFANKFPW
QLSGGMQQRASIARALCFDPKLLLMDEPFGALDEIVRDHLNAQLLALWRKTAKTVLFVTHSIPEAVYLSTRVVVMSPRPG
RIIDIVDCTALGRERPLEIRETPEFLRLGQRVREGLRAGHAYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-40 46
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-31 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-32 43