|
Name : thiC (METDI2276) Accession : YP_003067825.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein thiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2168113 - 2170005 bp Length : 1893 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8432721; Product type e : enzyme DNA sequence : ATGAACGCACCCGTCCGTCCCAAAGATCTTCCCAACAGCAATCCCGCCAGCGTGACCACCGGCCCCGTGCAGGGCTCGCG CAAGGTCTATGCGGAGGCGCCCGGCCGCCCCGACATCCGCGTGCCCTACCGGGAGATCGCCCTCTCCGACCCGAAGGAGG AGCCGGTGCGGGTCTACGACCCGTCGGGCCCCTACACCGAGACCGATGCGGCCATCGACCTCGAGAAGGGTCTGGCCCCG GTCCGCGAGCCGTGGATCGTCGGGCGCGGCTACGCCGCCGTGAAGCCGCGCGAGGTGAAGCCGGAGGACAACGGATTTGC GGCTGCCGACAAGCTCGTGGCGCCGTGCCCCGCCGAGCGGACGATCCGCCGGGCCGAGCCGGGGCAGCTGGTGACGCAGT ACGAGTTCGCCCGCGCCGGGATCATCACCGAAGAGATGATCTACGTGGCGCATCGCGAGAATGCCTGCCGCGCGCAGATG CTGGAGCGGGCGGAAGCCGCGCTCGCCGACGGCGACAGCTTCGGCGCGGCGGTGCCGCCCTTCATCACGCCCGAATTCGT TCGCGACGAGGTCGCCCGCGGGCGCGCGATCATCCCGGCCAACATCAATCACCTCGAACTCGAGCCGATGGCGATCGGCC GCAATTTTTTGGTGAAAATCAACGCCAATATCGGCAACTCGGCGGTGACGTCTTCCGCGGCTGAGGAAGTCGAAAAACTG GTCTGGTCGATCCGCTGGGGTGCGGACACGGTCATGGACCTCTCGACGGGCCGCAACATCCACAACATCCGCTCGTGGAT CGTGCGCAACTCGCCCGTCCCGATCGGCACCGTGCCGATCTATCAGGCGCTGGAAAAGGTCGGCGGCGACCCGCTGAAGC TCGATTGGGAGGTGTTCAAGGACACGCTCATCGAGCAGGCCGAGCAGGGCATCGACTACTTCACGATCCATGCCGGCGTG CGGCTGGCTCACGTGCCGCTGACCGCGCGGCGCACCACCGGCATCGTGTCGCGCGGTGGCTCGATCATGGCGCGCTGGTG CCTTGCCGGGCACCGCGAATCGTTCCTCTACGAGCGGTTCGACGAGATCTGCGACATCATGCGGGCCTACGACGTCTCGT TCTCGCTCGGCGACGGCCTGCGCCCGGGCTCGATTGCGGATGCCAACGACGCGGCCCAGTTCGCCGAGCTGGAGACCCTG GGCGAACTCACCAAGATCGCCTGGGACAAGGGCTGCCAGACCATGATCGAGGGCCCCGGCCACGTGCCGATGCACAAGAT CAAGGTCAACATGGAGAAGCAACTGCGCGAGTGCGGCGAGGCCCCGTTCTACACGCTTGGCCCGCTGACCACCGACATCG CCCCGGGCTACGACCACATCACCTCGGGCATCGGCGCCGCGATGATCGGCTGGTTCGGCACGGCGATGCTCTGCTACGTC ACGCCGAAGGAGCATCTCGGCCTGCCGAACCGCGACGACGTGAAGACCGGCGTCATCACCTACAAGATCGCCGCGCACGC CGCCGACCTCGCCAAGGGCCACCCCGCCGCGCAGCTCCGCGACGATGCCCTCAGCCGCGCCCGGTTCGACTTCCGCTGGG AGGATCAGTTCAACCTCTCGCTGGATCCCGACACGGCGCGCGCCTACCACGACGAGACCCTGCCAAAGGACGCGCACAAG GTCGCCCATTTCTGCTCGATGTGCGGCCCGAAATTCTGCTCGATGAAGATCACGCAGGATCTGCGCGCCGACGTGCTCGC GATGGAAGAGGCTGGCATCGTCATCGGCCAAGCCCAGCCAATGAGCGACGCCGAGCGCCAGGCCGGCATGGCGGCCAAGT CGCAGGAGTTCCTGGAAGAGGGCGGCAAGCTCTACGTCGACGCGGCGGAGTAA Protein sequence : MNAPVRPKDLPNSNPASVTTGPVQGSRKVYAEAPGRPDIRVPYREIALSDPKEEPVRVYDPSGPYTETDAAIDLEKGLAP VREPWIVGRGYAAVKPREVKPEDNGFAAADKLVAPCPAERTIRRAEPGQLVTQYEFARAGIITEEMIYVAHRENACRAQM LERAEAALADGDSFGAAVPPFITPEFVRDEVARGRAIIPANINHLELEPMAIGRNFLVKINANIGNSAVTSSAAEEVEKL VWSIRWGADTVMDLSTGRNIHNIRSWIVRNSPVPIGTVPIYQALEKVGGDPLKLDWEVFKDTLIEQAEQGIDYFTIHAGV RLAHVPLTARRTTGIVSRGGSIMARWCLAGHRESFLYERFDEICDIMRAYDVSFSLGDGLRPGSIADANDAAQFAELETL GELTKIAWDKGCQTMIEGPGHVPMHKIKVNMEKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYV TPKEHLGLPNRDDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFDFRWEDQFNLSLDPDTARAYHDETLPKDAHK VAHFCSMCGPKFCSMKITQDLRADVLAMEEAGIVIGQAQPMSDAERQAGMAAKSQEFLEEGGKLYVDAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 64 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 64 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 2e-178 | 61 |
