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Name : kdsB (METDI0217) Accession : YP_003065951.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 222280 - 223023 bp Length : 744 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 3023327; Product type e : enzyme DNA sequence : ATGTCCGATCCCCTGATCCTGATTCCGGCCCGCCTCGCCGCGACCCGGCTGCCGTCGAAACCGCTCGCCGACATCGCGGG CGTGCCGATGATCGTGCATGTCTGGCGCCGTGCCGTGGAGGCGGGAATCGGTCCCGTCGTGGTCGCCACCGACACCGACG CGGTCGCCGAGGTGATCGAGGCGCAGGGCGGGCTGGCGGTGATGACCCGGCCCGACCACCCCTCCGGCTCCGACCGTCTC GCGGAAGCGCTGGAGATCGTCGATCCCGACGGCAATCACGACGTCGTCGTCAACGTCCAGGGCGACCTGCCGACCATCGA CCCGGCGATCATCGCCGCTTCGGTGATGCCGCTCGCCGACCCGCAGGTCGATATCGCCACCCTCTGCGCCGTGATCCACC GGCCCGAGGAGATGGACGATCCCAACGTGGTCAAGATCATCGGCCACACGGTGGGACCCAACCGGCTGCGCGCGCTCGCC TTCACCCGCGCCCGTGCCCCCTGGGGCGACGGGCCGCTGTTCCACCATATCGGCCTCTACGCCTATCGCCGGAAGGCGCT GGCGCGCTTCGTCGCCCTGCCGCAAGGCGAACTGGAGCAACGCGAGAAGCTGGAGCAGCTACGCGCGCTGGAGGCCGGCA TGCGCATCGACGCGATGATCGTCGAGGACCTGCCGCTCGGCGTCGATACCCCCGCCGACCTCGAGCGCGCCCGCACGCTG CTCGCCATCCGCCGCCTGAACTGA Protein sequence : MSDPLILIPARLAATRLPSKPLADIAGVPMIVHVWRRAVEAGIGPVVVATDTDAVAEVIEAQGGLAVMTRPDHPSGSDRL AEALEIVDPDGNHDVVVNVQGDLPTIDPAIIAASVMPLADPQVDIATLCAVIHRPEEMDDPNVVKIIGHTVGPNRLRALA FTRARAPWGDGPLFHHIGLYAYRRKALARFVALPQGELEQREKLEQLRALEAGMRIDAMIVEDLPLGVDTPADLERARTL LAIRRLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-26 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-26 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-26 | 42 |
