|
Name : METDI1372 (METDI1372) Accession : YP_003066976.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Unknown Product : tartrate transporter ttuB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2223 EC number : - Position : 1246677 - 1248020 bp Length : 1344 bp Strand : + Note : Evidence 3 : Function proposed based on presence of amino acid motif, structural feature or limited homology; PubMedId : 7592429; Product type pt : transporter DNA sequence : TTGGCACACAGAGACCAACGCATGCTTGCTTACCAGGAGGAAACGATGGACGCCGCGCTCGAGCGGGCAACCATGCGCAA GGTCGCATGGCGCCTGGTTCCATTTATCTGCCTTCTCTACTTCATCGCCTTCATCGATCGCGTGAACATTGGCTTTGCCG CGCTGACGATGAACAAGGATCTCGGCTTCTCATCGGCGGTATTCGGCTTCGGCGCCGGCATCTTCTTCTTCGGATATTTC CTGTTCGAGGTGCCCTCGAACATCATCCTCGACAAAGTCGGTGCCAGGATCTGGATCGCGCGGGTGATGATCACCTGGGG GATCATCTCGGGAGCCTTCGCCTTCGTGCAAGGCGAGTACAGCTTCTACACGCTGCGCTTCCTGCTCGGTGCGGCCGAGG CCGGCTTCTTCCCCGGCATTATCCTCTACTTGAGCTACTGGTTCCCGGCCCGGTACCGGGCCGGAGTCGTCTCGCTGTTC ATGGCGGCGGCGCCGATCTCGGTGGTGCTCGGCTCACCGATCTCCAGCGCCCTGCTCGGGATGGAAGGCGTCCTGGGCCT TCATGGCTGGCAATGGATGTTCCTTATCGAGGCCGCGCCCGCCGTGGTGCTCGGCGTGGTCGTGCTTTTCTACATGACCG ACCGCCCCGAGAAGGCGCGGTGGCTCTCCGACGAGCAGCGCGCCTGGCTCGTCGCGGAGATGAACGAGGAGCATGCCCGC AAGCAGGTCAGCGCCAAGCACGGCATCCTGGCCGGGATGGCCGATCCCCGCGTGCTGGCGCTGGCGCTCATCTATTTTGG CACCTCGGCGGGGCTCTACACCCTCGGCATCTGGGCGCCGCAGATCATCAAGAGCTTCGGCCTGTCCACCATGGCGGTCG GCTTTCTCAACGGCGTGCCGCCGACCATCGCGATCATCGCGATGATCCTGTGGGCCCGCCATTCCGACCGGACGGGCGAG CGCACCTGGCACGTGGTCATCGCCTGCCTCGTCGCCTCCGTCGGCCTGATGCTAGCTGGCGGTGCATCCTCGGCCGTCGC GGTCATCGCCGCGCTCAGCCTCGTCAACGTCGGCATCAGTGCGGCCAAGCCGCCGCTCTGGGCCATGCCGACAATGTTCC TGTCGGGCTCGGCGGCGGCTGTCGGCATTGCCACGATCAACTCGATCGGCAATCTCGGCGGCTTCGTCGGTCCCTGGGCG ATCGGCTGGATCAAGGATCAGACCGGCAGCTTCACCGGCGGCCTGATCTTCGTCGCCGGGCTGCTGATCTTTTCTGCGGT CGTCACCCTCATCGTCGCCCGAACCGGGCAGCGTCCTGAGCCGGCCGGCGCCGTCGCGCGCTGA Protein sequence : MAHRDQRMLAYQEETMDAALERATMRKVAWRLVPFICLLYFIAFIDRVNIGFAALTMNKDLGFSSAVFGFGAGIFFFGYF LFEVPSNIILDKVGARIWIARVMITWGIISGAFAFVQGEYSFYTLRFLLGAAEAGFFPGIILYLSYWFPARYRAGVVSLF MAAAPISVVLGSPISSALLGMEGVLGLHGWQWMFLIEAAPAVVLGVVVLFYMTDRPEKARWLSDEQRAWLVAEMNEEHAR KQVSAKHGILAGMADPRVLALALIYFGTSAGLYTLGIWAPQIIKSFGLSTMAVGFLNGVPPTIAIIAMILWARHSDRTGE RTWHVVIACLVASVGLMLAGGASSAVAVIAALSLVNVGISAAKPPLWAMPTMFLSGSAAAVGIATINSIGNLGGFVGPWA IGWIKDQTGSFTGGLIFVAGLLIFSAVVTLIVARTGQRPEPAGAVAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-62 | 46 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-62 | 46 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-62 | 46 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 8e-62 | 46 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-62 | 46 |
| hpaX | AAO17186.1 | HpaX | Not tested | tcd island | Protein | 1e-62 | 44 |
