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Name : kdpB (METDI0118) Accession : YP_003065858.1 Strain : Methylobacterium extorquens DM4 Genome accession: NC_012988 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase B chain Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 116594 - 118684 bp Length : 2091 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 6146979, 92202140, 93167625, 9858692; Product type t : transporter DNA sequence : ATGTCCCGCAAGACCTCATCGCTGTTCAGCGCCGCCCTGGTCAGGCCCGCTTTTCTCGGCTCCGTCAGGAAGCTCGACCC CCGCGCCATGATCCGCAACCCGGTCATGTTCGTGGTCGAGGTTGTGGCGGCCCTGACCACCGTGCTGTTCGTCCGTGACC TCGTCACCGGAGGCAGCGACCTGTTCTTCTCCGGCCAGATCATCCTCTGGCTGTGGTTCACCCTGGTCTTCGCCAACTTC GCCGAGGCGCTGGCCGAGGGCCGTGGCAAGGCCCAGGCCGACAGCCTGCGGCGTACGCGCACCGAGATGACCGCCAAGCG GCTCACCGGCCAGGGCCGAGCCTACGAGACCGTGTCCGGCACCAGCCTCAAGGTCGGCGATGTGGTGCTCGTCGAGGCCG GCGACCTCATCCCGTCAGATGGCGAGGTCATCGAGGGTGTGGCCTCCGTGAACGAAGCGGCCATCACGGGGGAGTCGGCC CCGGTCATCCGCGAGTCGGGCGGTGACCGCTCGGCGGTGACGGGGGGGACGCAGGTGCTCTCGGACGAGATCAAGGTCCG CATCACGGCCGCGGCCGGCTCGACCTTCGTCGACCGCATGATCGCCCTCGTCGAGGGCGCCGCGCGCCAGAAGACCCCGA ACGAGATCGCGCTCAACATCCTGCTCGCCGGGCTGACCATCGTGTTCGTCTTCGCCGTGGCGACCATCCCGAGCTTCGCC AGCTATGCCGGCGGCTCGATCCCCGTGATCGTGCTGGTCGCGCTGTTCGTGACCCTGATCCCGACCACCATCGGCGCGCT CCTGTCCGCCATCGGCATCGCCGGCATGGATCGTCTCGTCCGCTTCAACGTGCTCGCCATGTCGGGCCGCGCCGTCGAGG CGGCCGGCGACATCGACACGCTGCTCCTCGACAAGACCGGCACGATCACGCTCGGCAACCGCCAGGCCACCGCGTTCCGC CCCGTCCGTGGTGTCACCGAGCAGGATCTGGCCGACGCGGCGCAGCTCGCCTCGCTGGCCGACGAGACGCCCGAAGGCCG CTCCATCGTCGTGCTTGCCAAGGAGACGTACGGCATTCGCGCCCGCGACATGGCCGGGCTGAAGGCCACCTTCGTGCCCT TCACCGCGCAGTCGCGGATGTCGGGTGTGGACCTTGAAGGCTCGTCGATCCGCAAGGGCGCCGTCGATGCCGTCATCGCC TCCGTCTCCGCGCCGCCGATGGCCACCCGCGGCTCCAGTGCGGCCCTCGCCTACCGCCCGGCCGCCGAGACCGAGGTGGT GGCCGAGATCCGGGCCGTCGCGGAGGAGATTGCCAAGGCCGGCGGCACGCCGCTCGCGGTGGCCAAAGACGGACGCCTGC TCGGCGTCGTTGCCCTCAAGGATATCGTGAAGGGCGGGATCCGCGAGCGCTTCGCGGAGCTGCGCCGCATGGGCATCCGC ACGGTGATGATCACGGGCGACAATCCCATGACCGCAGCCGCCATCGCTGCGGAGGCGGGCGTGGACGACTTTCTCGCCCA AGCGACCCCCGAGGATAAGCTGGCGCTGATCCGGCGTGAGCAGGCCGAAGGTAAGCTCGTGGCGATGTGCGGCGACGGCA CCAACGATGCGCCGGCGCTGGCTCAGGCCGATGTCGGGGTCGCCATGAACACCGGCACGGTGGCGGCGCGCGAGGCCGGC AACATGGTCGATCTCGATTCCGACCCGACGAAGCTCATCGAGATCGTCGGCATCGGCAAGCAGTTGCTGATGACCCGCGG TGCCCTGACGACGTTCTCCATCGCCAACGACGTCGCCAAGTATTTCGCCATCATCCCGGCGATGTTCCTGACGCTCTATC CGCAGCTTCAAGCACTCAACGTCATGGGGCTGGCCTCGCCGCAGAGCGCGATCCTCTCCGCCATCATCTTCAACGCCCTG GTCATCGTCGCGCTGATCCCGCTCGCCCTGCGCGGCGTGACCTACCGCCCGGTCGGCGCGGCCTCGCTCCTGCGGCGCAA CCTGCTGATCTACGGCCTCGGCGGCATCCTCGTGCCCTTCGTGGCCATCAAGGCCATCGACCTCGCCGTCACCGCCCTCC ATCTCGCCTGA Protein sequence : MSRKTSSLFSAALVRPAFLGSVRKLDPRAMIRNPVMFVVEVVAALTTVLFVRDLVTGGSDLFFSGQIILWLWFTLVFANF AEALAEGRGKAQADSLRRTRTEMTAKRLTGQGRAYETVSGTSLKVGDVVLVEAGDLIPSDGEVIEGVASVNEAAITGESA PVIRESGGDRSAVTGGTQVLSDEIKVRITAAAGSTFVDRMIALVEGAARQKTPNEIALNILLAGLTIVFVFAVATIPSFA SYAGGSIPVIVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDIDTLLLDKTGTITLGNRQATAFR PVRGVTEQDLADAAQLASLADETPEGRSIVVLAKETYGIRARDMAGLKATFVPFTAQSRMSGVDLEGSSIRKGAVDAVIA SVSAPPMATRGSSAALAYRPAAETEVVAEIRAVAEEIAKAGGTPLAVAKDGRLLGVVALKDIVKGGIRERFAELRRMGIR TVMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLALIRREQAEGKLVAMCGDGTNDAPALAQADVGVAMNTGTVAAREAG NMVDLDSDPTKLIEIVGIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLTLYPQLQALNVMGLASPQSAILSAIIFNAL VIVALIPLALRGVTYRPVGAASLLRRNLLIYGLGGILVPFVAIKAIDLAVTALHLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 2e-158 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 1e-158 | 59 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-138 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-138 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-138 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-138 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-138 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-139 | 54 |
