Gene Information

Name : CLIBASIA_04220 (CLIBASIA_04220)
Accession : YP_003065358.1
Strain : Candidatus Liberibacter asiaticus psy62
Genome accession: NC_012985
Putative virulence/resistance : Unknown
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 935628 - 937730 bp
Length : 2103 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
ATGCGCCCTTCTTTTCTCAATCCCCTATTTGCTCCTTTATCAACTTTTCGAGGCGTTGGGAAAAAATATTCTTTGTTTTT
ATCCAAGATTATCAATTGTGGTAACGCAAATGAAACCCGTTTTATAGATCTCTTATTTTATCATCCTTCATCTTTCATTG
ACCGTCACTATCGTCCAAAAATTTCAGAAATTTCAGAAGAAAGAATAGTAACAATAACGGGTTATATTAGCCAGCATTCT
TCTTTTCAACTTCAAAAAAGAAGACCCTATAAAATTCTCCTTAACGATGGAACTGGTGAAATTACCTTATTGTTTTTTTA
TAGAAAAACCGAGATGTTGAAAAATGTTTTTTTTGAAGGGAGAAAAATTACCGTCACAGGAAAAATCAAAAAACTCAAAA
ATCGCATTATCATGGTTCATCCTCATTATATTTTTCATAATTCTCAAGATGTAAACTTCCCGCTTATTGAAGCAGTTTAT
TCTCTCCCGACAGGCTTATCAGTAGATCTTTTCAAAAAAATTATCGTTGAAGCACTATCAAGATTACCCGTATTACCTGA
ATGGATAGAAAAAGATTTATTACAAAAGAAATCCTTTCCTTCTATAGCAGAAGCATTCAATATTATTCATAATCCCCGTA
AAGCAAAAGATTTTGAGTGGACATCCCCAGCGAGAGAGCGACTTGCGTATGATGAATTATTAGCAGGACAAATTGCATTA
TTGTTAATGCGGAAACAATTTAAAAAAGAGATTGGTATTCCAATCAATGTTGAAGGGAAAATTGCTCAAAAAATTTTGCG
AAATATCCCTTTTTCTCCAACAAAAAGTCAAGAATCCGCTATCAAAGATATTCTGCAGGATATGTCACAAAAAAATAGAA
TGCTCCGTATTCTACAAGGTGATGTAGGCTCTGGAAAAACACTGGTTGCATTAATAGCAATGGCAGCAGCAGTGGAAGCA
GGAGGTCAAGCAGTTATCATGGCACCTATTGGGATTCTAGCACAACAACATTATGAATTTATCAAAAAATACACGCAAAA
TACCCAAATTATTGTCGAAATTATTACAGGAAATATGCCACAAGCCCATAGAAGAAAAGCACTAGAACGAATCGCTCACG
GTCAAGCGCACATCATCATTGGCACTCATGCTCTTTTTCAGGATTCCATTCAATATTATAAACTTATTTTAGTTATTGTC
GACGAACAACATCGTTTTGGAGTCCAACAACGTCTCAAATTGACTCAAAAAGCCACGGCTCCCCATGTTTTACTCATGAC
AGCCACTCCTATTCCCCGCACACTTGTTCTCACTTCTTTAGGGGATATTGATATTTCTAAAATAACGGAAAAACCTGCAG
GCAGAAAACCTATTAAAACTGTTATCATTCCTATTAACAGAATAGACGAAGTCATTGAAAGACTCAAAGTTGTTTTATCA
GAGGGTAAAAAAGCCTATTGGATTTGTCCTCAAATTGAAGAAAAAAAAGAATCAAACTTTCGTTCGGTAGTAGAACGCTT
TAATAGCCTGCATGAACATTTTACCTCGTCTATTGCTATAATTCATGGACGCATGTCCGATATTGACAAGGAATCAGTAA
TGGATTCTTTTAAAAATGGAACATGTAAATTATTAATTGCAACAACCGTCATTGAAGTCGGAATCGATGTTGTTGATGCC
TCAATTATAATCATAGAAAACGCAGAACATTTTGGACTCGCACAACTACATCAATTACGAGGACGCGTTGGACGCGGCGA
AGAAATATCCAGTTGTATTCTCCTATATCATCCTCCTCTGAGCAAAAACAGTTATACAAGACTATCAGTATTGAAAAATA
CAGAAGATGGATTTCTGATTGCCGAAGAAGATTTAAAACAACGCAAAGAAGGAGAAATCCTCGGCATCAAACAATCTGGA
ATGCCTAAATTTCTTATTGCTCAACCTGAATTGCATGATTCTTTGTTAGAAATAGCACGTAAAGATGCCAAACATATTCT
CACACAAGATCCAGATCTGACCAGTGTCCGAGGACAATCTATCCGAATACTTTTATATCTCTACCAATACAATGAAGCGT
TCCAATTTATCAGGGCAGGATAA

Protein sequence :
MRPSFLNPLFAPLSTFRGVGKKYSLFLSKIINCGNANETRFIDLLFYHPSSFIDRHYRPKISEISEERIVTITGYISQHS
SFQLQKRRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITVTGKIKKLKNRIIMVHPHYIFHNSQDVNFPLIEAVY
SLPTGLSVDLFKKIIVEALSRLPVLPEWIEKDLLQKKSFPSIAEAFNIIHNPRKAKDFEWTSPARERLAYDELLAGQIAL
LLMRKQFKKEIGIPINVEGKIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEA
GGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIV
DEQHRFGVQQRLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLS
EGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDA
SIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEEDLKQRKEGEILGIKQSG
MPKFLIAQPELHDSLLEIARKDAKHILTQDPDLTSVRGQSIRILLYLYQYNEAFQFIRAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-149 53