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Name : CLIBASIA_03650 (CLIBASIA_03650) Accession : YP_003065248.2 Strain : Candidatus Liberibacter asiaticus psy62 Genome accession: NC_012985 Putative virulence/resistance : Virulence Product : polysialic acid capsule expression protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 803890 - 804915 bp Length : 1026 bp Strand : + Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : TTGCATTTTTATTTTTCGCATTTTAAATCTGTTACAAGAAAAGGTCATAGCCTTATGAAGAATTCAACTGTTCAATGTGC TCTTCGAAGCATTATAGCAGAAAAGAGAGGGTTAAGTTCTTTAGAATCATCTTTGCAAGGGGAATTATCTTTTCAATTCC ATTGTGCTGTAGAAAAAATCAAAGCTATTAAAGGTCGTGTTGTTATTACTGGAATTGGTAAGAGTGGTCATATTGGTTCA AAATTAGCTTCTACATTGGCTTCTACAGGAACTCCTTCATTTTTTGTGCATGCTGCCGAAGCGAGTCATGGTGATCTTGG TATGATCACGCGAGATGATTTGATTATTGTTCTATCGTGGAGTGGGAGTAGTGATGAATTAAAGGCTATTTTATATTATG CACGTCGATTTTCTATTCCATTAATTGCTATCACATCGGAAAATAAATCAGTTGTGGCATGTCATGCAGATATTGTTCTA ACATTGCCGAAAGAACCTGAATCATGTCCACATGGTTTGGCTCCGACAACTTCTGCTATTATGCAATTGGCAATAGGAGA TGCGTTGGCAATAGCGCTTCTGGAATCGCGAAATTTTTCAGAAAATGATTTTTATGTTTTGCATCCAGGTGGAAAATTAG GCACGTTGTTTGTTTGTGCGTCCGATGTCATGCATTCAGGGGATAGTATTCCTCTTGTGAAGATTGGTTGCCCATTAATA GATGCTATTACTATTCTTTCAGAGAAAAGATTTGGTTGTGTTGCAGTCGTTGATGAAGGTCAAAAGTTGAAGGGTATTAT AACTGAAGGAGACATATTCAGAAACTTTCACAAAGATTTAAATACACTCAGTGTTGAAGATGTTATGATAAAAAATCCTA AGGTTATTTTGGAGGATACTCTTCTAACGGTTGCTATGCAACTTTTACGGCAACACAATATTTCTGTTCTTATGGTTGTG GATGATTGTCAAAAAGCAATAGGTATCGTTCATTTTTTAGATCTGTTGAGATTTGGCATAATATAA Protein sequence : MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV DDCQKAIGIVHFLDLLRFGII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-40 | 42 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-40 | 42 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-39 | 42 |
