Gene Information

Name : CLIBASIA_02125 (CLIBASIA_02125)
Accession : YP_003064951.1
Strain : Candidatus Liberibacter asiaticus psy62
Genome accession: NC_012985
Putative virulence/resistance : Virulence
Product : ABC transporter nucleotide binding/ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 742002 - 742844 bp
Length : 843 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGAAAACAGCTGTCGCTTCCACGAAAGGTGGACTAGAATTAAAAGATATATCAGTAACATATCCTAATGGTTATTGCGC
TTTGGAAGACGTCAATCTTTTTATTCCCGAGAATACAATAACTGCCTTAATTGGCCTAAATGGGGCTGGAAAATCTACTT
TGTTTCAAGCTATCATGGGGCTTATCCCACTAGATAAAGGGTCAATATCCATCTTCAATCAAACCGTGGAAAATGCGCTG
AAAGCAGATCTCATTGCTTATATACCCCAAACAGAATCCATAGATTGGACTTTTCCTATTCTCGTAGAAGATGTTGTGAT
GATGGGTCGTTACAAACATATGAACTGGCGACGTGTAGCGTCAAACAACGATTATCGAATCGTAACGGAGGCATTAGAAA
ACGTAGGGATGTCTTCTATGCGCCAAAGACAAATCGGCGAACTTTCCATAGGACAGCAAAAGCGCGTTTTTCTTGCCCGT
GCACTCGCCCAAAAAAGCCAGGTTATCATCATGGACGAACCTTTTGCAGCAATTGATTTTAAGACGGAAAGAGAAATGAT
TTTTCTCTTAAAATCGTTACTCAACGAAGATATAATGATCTTGGTTTCTACGCATAATATTAATTCCATTCCTTCTTTTT
GTGACCGAACTATTTTTCTCAAAAAGACAGTGCTCGCTTCTGGGTTAACATCGGATATCTTTAATGAGGATAATATTCAA
AAAACCTTTGGAGCTCAAGTATCTCCTCAGTCGAGTATCTTGAATGAGAGTAATATTCAAACAACTTTTAAAGCTGAGGT
ATATCCTCAAATAAATTCCACCATGTGCATAAAAAAAAGCTGA

Protein sequence : 
MKTAVASTKGGLELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENAL
KADLIAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQIGELSIGQQKRVFLAR
ALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLASGLTSDIFNEDNIQ
KTFGAQVSPQSSILNESNIQTTFKAEVYPQINSTMCIKKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-62 52
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-62 52
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-62 52
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-63 52
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-63 52

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLIBASIA_02125 YP_003064951.1 ABC transporter nucleotide binding/ATPase BAC0350 Protein 6e-63 52
CLIBASIA_02125 YP_003064951.1 ABC transporter nucleotide binding/ATPase BAC0440 Protein 7e-60 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLIBASIA_02125 YP_003064951.1 ABC transporter nucleotide binding/ATPase VFG0526 Protein 5e-63 52