Gene Information

Name : xerD (CLIBASIA_02370)
Accession : YP_003065000.2
Strain : Candidatus Liberibacter asiaticus psy62
Genome accession: NC_012985
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 696058 - 696960 bp
Length : 903 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
ATGATGAGCTCTGAGCGAGCATCTAGTATTAATACACTCTCTGCTTATAAAAGAGATTTGAAAGAGATGCAGAACTTCCT
CAATAATAAAGAAATATCCCTATCAGCAGCCTCTACAAATCATCTTATTTCCTATCTAAACCATTTGTCCCAAAGAAAAT
TAGTAACCAGCTCTCAAAGAAGAAAAATATCTGTAATACGACAATTCTATAATTTTCTTTGTTATGAAGGATTGCGTAAA
GACAATCCTTCCGACACTCTGGAACTGCCCAAAAAAAATCATATACTTCCTAAGACGTTACACAAAGACACCATAGCAAA
TCTTCTAGAACAAGCTAAAATAGAAGCAGAAAATCCTGCTCCCGGTCAGTGGAAACGGGTCCGTATATTTCTCTTGATAG
AGCTATTGTATGCGACTGGTATGCGTGTAAGTGAATTAGTTACGCTCTCCGCTCATACTCTAAATTTGACAGAACGTACA
ATGATCATTCAGGGAAAAGGTAATAAAGAACGTCTTGTGATTCTTTCTCCTTCCGCCTTACATGCCCTACAGATGTACAA
AAAAACTTGTTCTTCTATGAAAATGACAGGAAATGACTTGTGGTTGTTTCCATCGTCCACAAAGACAGGACATCTATCAC
GCCAAGTGTTTGCAAGAGACTTAAAAGCATTAGCTGCGCGTGCTGGTATACAAAAAAAGAATATTTCTCCCCATATAATA
CGCCATGCATTCGCAAGTCATCTTCTAGAAGGCGGAGCTGATCTACGCACCATACAAATACTTTTAGGTCATACAGACAT
ATCAACAACACAAATATACACTCACCTGTTACCAGATAAGCTGCAAAAACTAGTTCAAGATTACCATCCTCTTGCTAAGA
AGGAAAAGAAACATTACAATTGA

Protein sequence :
MMSSERASSINTLSAYKRDLKEMQNFLNNKEISLSAASTNHLISYLNHLSQRKLVTSSQRRKISVIRQFYNFLCYEGLRK
DNPSDTLELPKKNHILPKTLHKDTIANLLEQAKIEAENPAPGQWKRVRIFLLIELLYATGMRVSELVTLSAHTLNLTERT
MIIQGKGNKERLVILSPSALHALQMYKKTCSSMKMTGNDLWLFPSSTKTGHLSRQVFARDLKALAARAGIQKKNISPHII
RHAFASHLLEGGADLRTIQILLGHTDISTTQIYTHLLPDKLQKLVQDYHPLAKKEKKHYN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-29 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-29 43