Gene Information

Name : smpB (CLIBASIA_00800)
Accession : YP_003064688.1
Strain : Candidatus Liberibacter asiaticus psy62
Genome accession: NC_012985
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 159969 - 160448 bp
Length : 480 bp
Strand : -
Note : COG0691 tmRNA-binding protein

DNA sequence :
GTGAGTTTGAAATCTCGTGGCAATCCGCCTAAAAAGGTGGTATCTGACAATAGAAAAGCTCGATACAATTATCATATTGT
TCGCTCATTTGAGGCTGGTATCGTGTTAACGGGAACCGAAGTGAAGTCGTTGCGGGTATCAAAAGTTAATATCTCCGATT
CTTATGCTACTTTTGAAAATGATGAAATTTGGTTAACAAATTCTTATATCCCAGAATATCTTCAAGCCAATCGTTTTAAT
CATTATCCGCGTAGAAATCGTAAACTATTGCTGTCTAAAAGAGAAATACATCGTTTGTATGCGGCTGTACGTCGCGATGG
TATGACTCTTGTTCCTATGAAAATTTATTTTAATGCAAAAGGACTTGCAAAAATTGATCTTGCCCTTGCTCAAGGTAAGA
AGAATTATGATAAGCGTGAAACTGAGAAGAAACGCGACTGGGATCGTCAAAAACACCGAATTCTTAGAGAGCACAACTGA

Protein sequence :
MSLKSRGNPPKKVVSDNRKARYNYHIVRSFEAGIVLTGTEVKSLRVSKVNISDSYATFENDEIWLTNSYIPEYLQANRFN
HYPRRNRKLLLSKREIHRLYAAVRRDGMTLVPMKIYFNAKGLAKIDLALAQGKKNYDKRETEKKRDWDRQKHRILREHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 6e-31 50
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-24 47