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Name : lysS (CLIBASIA_05100) Accession : YP_003065531.1 Strain : Candidatus Liberibacter asiaticus psy62 Genome accession: NC_012985 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1120506 - 1122014 bp Length : 1509 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAATAATACTCTTACTCCCGAATCTTTATCTTCTAATTCTATCGAAGTTCGCTCTCAAAAGTTGAATATGTTGCGAAA ATCTCTAGCAGAAGTTTATCCTGCCCATTTTCATCGTGATATAACAAATGCTGAAGTGCGTGAAAAATATTCTCATCTTC AAAATGATGAGAAATCACAAGATATGATTACTGTTGCTGGACGCGTCTACTCTTCCCGAAATTCTGGAATGTTTATGGAT ATTCACGATGCAAGTGGTAAAATTCAGATTTTTACTCATAAAGATACAGCCGATCAAGATTCGCAAAATTTATTATCTAT GATTGATATCGGTGACATTATAGGAATAACAGGACAAGTACGTCGCACTAAACGTGGCGAACTCACAGTGAACGCACAAA AAATAATAATGCTCAGCAAAGCATTAAATTCTATCCCAGAAACATATTATGGATTATCTGATGTCGAAATCCGCTATCGT AAAAGATATCTTGATATTATAAGCAACTCCGATTCTAAAATACGTTTCCAACAAAGAAGCCTTCTTATTTCCCAAATACG CCATTTTATGGAAAAAAAAGGATTCATGGAAGTAGAGACTCCTATATTACAACCTATTTACGGAGGAGCTACCGCTGATC CATTCAAAACGCATCATAATATTCTAAAAGCCGATATGTATCTACGTATTGCACCCGAACTTTACCTTAAACGCGTTTTA ATATCAGGACTGACTGACCAAGTATTTGAATTAAATCGTAATTTTCGTAACGAAGGAGTGTCCTCACGGCATAATCCAGA ATTTACAATGATCGAAGCCTATTGGGCTTATACTGATTATCGAGATATGATGAAACTAGTCGAAGATCTTTGTCATAATC TTGCTAAAACTCTTCATGGTACAACAGATATTCCATTTGGAGAAAAAGTCATTTCTTTCAAAGCACCGTTTGCATGTAAA TCTATGCTTCAGTTGGTCAAGGAAGCAACAGGACTTGATTTTATGCTTTTAAAAAGCGATCAAGAAGCACGTGTTGCAGC ACAAAGTATTGGGATTACAGTAGAAAACGATGCTCTATGGGGTGAAGTCATGATGACAATTTTCGAAGAAAAAATCGAAA AAAATATTGTGAATCCAACGCATATTACAGATTTTCCCAAAGATATTTCACCTTTTGCAAAAGAAGTGGCGGGCGAAAAG CGTCTGGTAGAGCGTTTTGAAACCTATTGTAATGGATGGGAAATATGTAATGCATTTTCTGAACTCAATGATCCCGTAGA GCAACGCATACGCATGGAACAACAAGTTGAACAATCCCATCAACGTGGAGAACACACTATTCTTGATGAAGATTTTTTAG ATGCAATGACCTACGGTATGCCTCCAGCAAGTGGATTAGGTCTTGGTATAGATCGCCTAATCATGCTATTGACCAATGCC CCTTCTATTCGAGATGTTATCCTCTTTCCAGCGCAGCGTGTGAAAAATGGTAGTCGGAAAACAGAATAA Protein sequence : MNNTLTPESLSSNSIEVRSQKLNMLRKSLAEVYPAHFHRDITNAEVREKYSHLQNDEKSQDMITVAGRVYSSRNSGMFMD IHDASGKIQIFTHKDTADQDSQNLLSMIDIGDIIGITGQVRRTKRGELTVNAQKIIMLSKALNSIPETYYGLSDVEIRYR KRYLDIISNSDSKIRFQQRSLLISQIRHFMEKKGFMEVETPILQPIYGGATADPFKTHHNILKADMYLRIAPELYLKRVL ISGLTDQVFELNRNFRNEGVSSRHNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTTDIPFGEKVISFKAPFACK SMLQLVKEATGLDFMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITDFPKDISPFAKEVAGEK RLVERFETYCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNA PSIRDVILFPAQRVKNGSRKTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-93 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003065531.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-93 | 44 |
