Gene Information

Name : JDM1_0089 (JDM1_0089)
Accession : YP_003061675.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Unknown
Product : intracellular protease/amidase ()
Function : -
COG functional category : R : General function prediction only
COG ID : COG0693
EC number : -
Position : 93431 - 94105 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAGTTTTAATTGTCGAAACCAATATCACTCGTTACCAAGGAACTAATGAGCCGACTGGTCTTTGGTTAGGTGA
AGCCGCTGAGTTCGTCGATGAAATGCAGCAAGCCCAAATTGCCGTTGACTATGTTAGTCCTAATGGTGGCTTCGTGCCCC
TTGACCCGCGTAGTATGAAATATACCGATGCCGCCACAATGGCCGTGTATGAAGATTCTGACTTCATTAATCGGGCCCTT
AAGAACACGCTCAAGCCTAGTCAGGTCGATCCCGATGATTACACTGCTATTTACTATACCGGGGGCCACGGTGTGATGTG
GGACTTTCCGGACAACCCTGAGTTACAAGCCATCGCACTGGCCATTTATCAACATGGTGGATATGTGACCTCCGTTTGTC
ACGGAATTGCTGGCCTCCTAAACATCAAAGACCAAACGGGCCAATACTTGATTGCTGGCAAAACCATTACGGGCTTTACC
GCAACTGAAGAGCTGATTGCCGGCAAAAAACGGATCGTCCCGTTCCTTAACCGTGAACGAGCTACTGCTCACGGTGCTAT
CTTTAGTCAGCATCGATTTTATCGCGAATATGCAATTACTGACGGCCAATTGATCACTGGTCAAAATCCGTTCTCAGCAC
GCGCGGTCGCACGCCAATTGATTGCTAAACTATAA

Protein sequence :
MKKVLIVETNITRYQGTNEPTGLWLGEAAEFVDEMQQAQIAVDYVSPNGGFVPLDPRSMKYTDAATMAVYEDSDFINRAL
KNTLKPSQVDPDDYTAIYYTGGHGVMWDFPDNPELQAIALAIYQHGGYVTSVCHGIAGLLNIKDQTGQYLIAGKTITGFT
ATEELIAGKKRIVPFLNRERATAHGAIFSQHRFYREYAITDGQLITGQNPFSARAVARQLIAKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0095 YP_252010.1 hypothetical protein Not tested SCCmec Protein 2e-43 45