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Name : nrdE (JDM1_0566) Accession : YP_003062152.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : - Position : 597231 - 599396 bp Length : 2166 bp Strand : - Note : Catalyzes the rate-limiting step in dNTP synthesis DNA sequence : ATGACCTTAAAAGATTTAAAAGACGTCACGTATTACGACTTAAATAATGAGATCAATATTCCCGTTAACAATCAGATTCC GCTCAACAAGGATCAGGAGGCACTTGCCGCTTTCCTTGAACAAAATGTTGAACCGAACACGATGAAATTTGATAGTCTTA AGGCGCGCTTTGACTACCTACGTGAACACGACTATTTGGAAACCCCTGCCATTGATAAGTATGATTTTAGCTTTATCGAA AAACTTTACGATTACTTGCGGTCGCAAGACTTCCACTTCAAGACGTTTATGGCGGCTTACAAATTTTATGCCCAATACGC CTTAAAGACGGATGATGGCGACTATTACTTGGAAAACTTTATTGACCGTGTGGCAATGAACGCCCTCTACTTTGCTGATG GTAATGAAGACTTGGCGATGGACCTGGCCGACGAAATCGTTCACCAACGTTATCAACCAGCCACCCCCAGTTTTCTCAAT GCTGGCCGGGCCCGGCGTGGTGAATTGATTTCTTGCTTCTTGATTCAATCGACCGATGATATGAACTCAATCGGCCGGAC GATTAACTCCGCGTTACAACTTTCTCGGATCGGTGGCGGGGTCGGTATTAACCTCAGCAACTTACGGGGTGCCGGTGATC CAATCAAGCATATCGATGGCGCTGCTAGTGGGGTCGTACCCGTCATGAAATTATTAGAAGACAGTTTCTCCTACTCTAAC CAATTAGGTCAACGTCAAGGTGCCGGGGTCGTTTACCTTAGTGTCTTTCATCCAGATATTATTGCCTTTCTTTCTGCTAA GAAGGAAAACGCCGACGAAAAGATTCGGCTCAAGACGCTTTCACTCGGTGTCACCGTACCCGACAAGTTTTACGAGTTGA TCAAGGCTGACGCTGATATGTATCTCTTCAGTCCTTACGGCGTTGAACGCGAATACGGGGTACCGTTCTCATATGTCGAT ATCACCAAAGAATACGACAATATGGTTAAGAACCCGAACATCCGTAAAACTAAGATCAAGGCGCGTGACCTTGAAAATGA AATCAGCAAGTTACAACAAGAATCTGGCTACCCATACGTCGTCAACATTGATACCGCGAACCGCGAAAATCCTATCGACG GTAAAATTGTGATGAGTAACTTGTGCTCAGAAGTGATGCAAGTGCAAACTCCATCATTAATTGATGACCAACAACAGTAT GAGAAATTGGGAACTGATATTAGTTGTAACCTTGGTTCGACTAACATTGTTAACTTAATGACCTCTCCAGACTTTGGACA TTCTGTTGAAGCCATGGTGCGCGCGTTAACTTTTGTTACTGACCACTCTAACGTCGACGTCGTTCCTTCCATCCAAAAAG GGAACCGTCAAGCCCATACCATTGGGTTAGGTGCCATGGGGCTCCATGCCTTTTTCGCGAAGAATCAGATGGAATACGGC AGTAAAGAAGCCGTTGACTTTACCAATATCTACTTTTTACTCTTAAACTACTGGACCTTAAAAGCTTCTAACGAAATTGC GCGTGAACGTCACGAAACCTTCGTTAACTTTGAAAAATCCAAGTATGCCGATGGTTCTTACTTTGACAAGTACACCACCC AAGATTGGCAACCAAAATATGACAAGACCACTGCACTGTTTGACGGTATCTTCATTCCAACCAAAGCTGATTGGGAAGCC CTCAAAGAAGCCGTTATGCGTGATGGCCTCTATCATCAAAACCGGATGGCTGTCGCCCCAAATGGGTCAATCTCGTACAT CAACGATACGACTGCCAGCCTACACCCAATCATCAACCGGGTCGAAGAACGACAAGAAAAGAAAATTGGTAAGATTTATT ATCCCGCTCCTTACCTATCTAATGATACAATTAACTATTATAAGTCAGCATACGATACTGATATGCGTAAAGTTATCGAT GTCTATGCGGCTGCTCAACAACACGTTGACCAAGGAATGAGCTTGACCCTCTTCATGCGGTCAACTATTCCAGCTGGCTT ATACGAATGGAAAGATGGTCGCACTGATAAGATGACCACGCGGGACTTAAACATTTTACGGAACTACGCCTACCGCAAAG GGATCAAATCGATTTATTATATTCGGACCTTTACGGACGACGATGGCGAAGTCGGTGTTAACGAATGTGAAAGCTGCGTA ATTTAG Protein sequence : MTLKDLKDVTYYDLNNEINIPVNNQIPLNKDQEALAAFLEQNVEPNTMKFDSLKARFDYLREHDYLETPAIDKYDFSFIE KLYDYLRSQDFHFKTFMAAYKFYAQYALKTDDGDYYLENFIDRVAMNALYFADGNEDLAMDLADEIVHQRYQPATPSFLN AGRARRGELISCFLIQSTDDMNSIGRTINSALQLSRIGGGVGINLSNLRGAGDPIKHIDGAASGVVPVMKLLEDSFSYSN QLGQRQGAGVVYLSVFHPDIIAFLSAKKENADEKIRLKTLSLGVTVPDKFYELIKADADMYLFSPYGVEREYGVPFSYVD ITKEYDNMVKNPNIRKTKIKARDLENEISKLQQESGYPYVVNIDTANRENPIDGKIVMSNLCSEVMQVQTPSLIDDQQQY EKLGTDISCNLGSTNIVNLMTSPDFGHSVEAMVRALTFVTDHSNVDVVPSIQKGNRQAHTIGLGAMGLHAFFAKNQMEYG SKEAVDFTNIYFLLLNYWTLKASNEIARERHETFVNFEKSKYADGSYFDKYTTQDWQPKYDKTTALFDGIFIPTKADWEA LKEAVMRDGLYHQNRMAVAPNGSISYINDTTASLHPIINRVEERQEKKIGKIYYPAPYLSNDTINYYKSAYDTDMRKVID VYAAAQQHVDQGMSLTLFMRSTIPAGLYEWKDGRTDKMTTRDLNILRNYAYRKGIKSIYYIRTFTDDDGEVGVNECESCV I |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 0.0 | 51 |
