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Name : nrdF (JDM1_0565) Accession : YP_003062151.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit beta Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0208 EC number : - Position : 596193 - 597203 bp Length : 1011 bp Strand : - Note : B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE DNA sequence : ATGGCAACAGACTTGGCTTACTACCAAAAACTGCTCAGTAATGGCAACTATAAGGCAATTAACTGGGATCGAGTTTCAGA TGCAATTGATAAAAGTACTTGGGAAAAGTTAACCGAACAATTTTGGTTAGACACCCGGATTCCAGTTTCCAACGACATGG CAGACTGGCGTGAATTAGATGATGATCACCGGTGGGTCGTGGGACACGTTTTCGGCGGTTTGACGCTGCTAGATACGTTA CAATCACAAGACGGTCTGCAAGCACTTCGCCGCAACGTCTTAACCTCACATGAAACGGCCGTACTAAATAACATCCAATT CATGGAATCTGTTCATGCAAAGAGTTATTCAACAATTTTTGAAACATTAAATACGCCGGACGAAATTAATGAAATTTTTG ACTGGAGTGACAGTGAAGAATTCTTGCAAGCAAAAGCCCAATGGATCTACAAGCTTTACGATAACATCGACGAAGATCCA TTGAAGCAAAAAGTTGCGAACGTCTTTTTGGAAACTTTCCTGTTCTATTCTGGTTTCTATACGCCACTGTACTACTTGGG CCACAACCAATTGCCAAACGTTGCCGAAATCATTAAATTGATTTTGCGGGACGAAAGTGTCCATGGAACTTACATTGGTT ATAAGTTCCAATTAGGCTTCAAAGACCGTTCTGAAAAGCAGCAGGCAGAATTTAAAGACTGGATGTTCGATTTCTTATAC AAACTCTATGAGAATGAAGAAAACTACATTCATTTAGTTTACGATCAAATTGGTTGGTCTGATGAAGTCTTAACTTTTAG TCGTTATAACGCCAACAAAGCCTTGATGAATCTCGGCCAAGATGCCCTCTTCCCAGATACTGCGGAAGACGTTAACCCGG TCGTCATGAACGGGATTTCAACGGGGACTTCTAACCATGACTTCTTCTCACAAGTTGGGAATGGTTACCGCTTGGGTCAA GTTGAAGCAATGCAAGACACCGACTACGATATTGGTAATCCAGACGATTAA Protein sequence : MATDLAYYQKLLSNGNYKAINWDRVSDAIDKSTWEKLTEQFWLDTRIPVSNDMADWRELDDDHRWVVGHVFGGLTLLDTL QSQDGLQALRRNVLTSHETAVLNNIQFMESVHAKSYSTIFETLNTPDEINEIFDWSDSEEFLQAKAQWIYKLYDNIDEDP LKQKVANVFLETFLFYSGFYTPLYYLGHNQLPNVAEIIKLILRDESVHGTYIGYKFQLGFKDRSEKQQAEFKDWMFDFLY KLYENEENYIHLVYDQIGWSDEVLTFSRYNANKALMNLGQDALFPDTAEDVNPVVMNGISTGTSNHDFFSQVGNGYRLGQ VEAMQDTDYDIGNPDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1479 | YP_001800873.1 | ribonucleoside-diphosphate reductase subunit beta | Not tested | Not named | Protein | 8e-68 | 48 |
