|
Name : tex (JDM1_0466) Accession : YP_003062052.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 508529 - 510700 bp Length : 2172 bp Strand : + Note : - DNA sequence : ATGGATAATCAGATTTTAACGTTAGTTGATCAAACGCTGACGAAGTTTAAACCGCAACAGATCAAAGCGGTTCTCGGACT CATGGACGAAGGCAACACCGTTCCGTTTATCGCACGGTATCGAAAGGAACGTACCGGTAACTTAGATGAAGTTGAAATTC GCGAAATTAAAGATAACTATGATCGGCTTGCGAGTCTAGAGAGTCGTAAGGCAGATGTGATGAAGTTGATCGCTGAACAA GATCACTTGACGCCGGCTTTAAAGCAAGCCATTGAAAAAGCTGACAAGTTGCAAGATGTCGAAGATTTGTACTTACCGTA CAAACAGAAGCGACGTACGAAGGCAACGATTGCGAAAGATGCTGGACTGGAGCCGTTAGCAGCTTGGTTATTACGCTTTC CGGCAAGTGGTATTCAGGAACACGCGGCGCAGTTTGTGAACGAAGCGCAGGACATCACAGACGCGAATAACGCGTTAGCT GGAGCTCACGAAATCTTGGCTGAGGCCTTTGGTGATAATGCCGGTTTACGAAACTGGGTCCGGAATTATACGCGTGACCG GGGCTTACTAGTCGCAAAAGTGAAACCCAAGGGTAAAGCAGCCGATGAACAAGGTGTTTACCAACAGTATTATGATTTTA ATAGTCCCATCAAGCAGATGGTGCCGTACCGGGTACTGGCTATCAACCGTGGGGAAGCCGAAAAAGTATTGAAAGTCAGC ATTGATGTTGATCGTGCTGGAATTGACCGGTATTGTCATTTTCGTTTTATTGGTCAGCACCACGGCCCAGCGATTGAACT AGTAGAAGCTGCTTATCAGGATGCCTACAAACGCTTTATTGGCCCAGCCATCGAACGTGAACTTCGCAACGAATTGAGTG CGGCTGCCAATGAACAGGCCATCAAAGTCTTTGGCGATAATTTGTACCACTTATTAATGCAGGCACCATTAAAAGGTCGC GTGGTATTAGGGTTCGACCCTGCTTACCGGACGGGGTGTAAATTAGCCGTGATGGACGCGAATGGTAAGTTCTTAGATAA GCTCGTGATTTATCCACACAAACCAGCCCCAACTGCCAAACGGAAAGCTGCTGCGGGTGAGTTTAAAGCCTTTTTGGAGA AGTATCATGTTGAAATGATTGCGATTGGTAACGGGACGGCTTCCCGCGAATCCGAGGAGTTTGTGGCACAGGTATTGAAG ACTATGACCCGACCGGTTTATTATGTCATCGTGAACGAAGCCGGGGCTTCCGTGTACTCTGCTAGTGCTAAGGCGCGCGC CGAATTTCCTGAGCTACACGTTGAACAACGTAGTGCGATCAGTATCGGCCGGCGACTACAAGACCCACTGGCAGAATTGA TCAAAATCGATCCGAAGTCAGTGGGAGTGGGGCAATACCAACACGATGTGCCCCAGAAGGAATTGACAACGCAGCTAGAT ACGGTGATTGAGACCGCGGTTAACCAAGTTGGGGTCAATTTGAATACCGCTAGTTCGGAGCTATTGACGCATATTTCGGG GCTATCCAGCACGATTGCCCAAAATGTGATTACTTATCGGGATGAAAATGGCGAATTCACGAGCCGACCACAATTGAAAA AAGTGCCGCGGTTGGGACCGAAAGCTTATGAACAAGCGGTCGGCTTCCTGCGAATCATTGACGGCAAGAATGTTTTTGAT AACACGGATATTCATCCAGAAAGTTATCCCGCAGCCAAAGCGTTATTGGCAGCGGCTGGATTGAAGACGACGGACGTTGG GACGACTAAAGCCCAACAGTTGAATCAATTAGATTTAGCGCAACTTGCGACCAGCACCGGTGTCGGTGAACTGACCTTAA AGGATATTATTAGTAGTTTGCAAAAGCCCGGGCGTGATGTTCGTGATACGATGCCCGCACCGTTACTCCGGCAAGACGTT TTAAAGATGAGTGATCTAAAACCAGGGATGCAGTTGCAAGGAACCGTCCGCAACGTGGTCGACTTTGGGGCGTTTGTGGA TATTGGTGTCAAGCAAGATGGCCTCGTACATGTCTCCAAACTAACGGATAAGTTCTTGAAAGATCCGCGTCAGGCGGTGG CAGTTGGCGACATCGTAACGGTGTGGGTCGAAGAAGTTGATGAACAGCGGCAGCGCATCGCTTTGACGATGATTGCACCG GCTGAAGCATAA Protein sequence : MDNQILTLVDQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNYDRLASLESRKADVMKLIAEQ DHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANNALA GAHEILAEAFGDNAGLRNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQAIKVFGDNLYHLLMQAPLKGR VVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAKRKAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLK TMTRPVYYVIVNEAGASVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGPKAYEQAVGFLRIIDGKNVFD NTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDV LKMSDLKPGMQLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP AEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-130 | 45 |
