|
Name : JDM1_0046 (JDM1_0046) Accession : YP_003061632.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : prophage Lp3 protein 18 Function : - COG functional category : R : General function prediction only COG ID : COG3740 EC number : - Position : 51232 - 52773 bp Length : 1542 bp Strand : + Note : - DNA sequence : ATGAAACAAGACCGACGGTTAACGATTGACGCCGAATTGCGAGCACAAATGCCGCAGTCAGAAACACCCGAAGACGGGCC AGCTGAAAATTCAGCAGACCCGCAATCTAAAGGCTCACAGACATCTAAGGGCAAAACAATTAGTGGTTACGCAATTGTAT GGAACTCACCAAGTAAAGATTTAGGCGGTTTCACCGAGGTTGTAACCCCCAAGGCCCTTGATGGTGTCGATTTATCAAAC GTTCTTATGCTCAATAACCACGACTACACTCAAGTGTTAGCCAGTGTTAAGGCGGGCACATTAACGTTAGAAACGGACGA CAAGGGGCTACATTTCACCGCACAGTTGCCGAATACGTCGTTTGCTAATGATGTTTACGAAGAAGTTCAAAGTGGGAACG TTGATTCCTGCTCGTTTGGCTTTGATAGTGACGACGACACCGACGAATGGACTAAAGATGATGGAGGTAATATCACGCGC ACCATTAATCAAGTTAAGAGCTTGTTCGATGTGTCAGTGGTAGCCGTTCCCGCTTATGACGATACCAATGTGCAAGTTGA TACCCGTAGCTATGAAAAATGTATTAACCAAGAAAAGGAGCCTGACAACATGGCAAAACAAACAATTATTGATCCCAATA ACAATGACAATGGTAACGGAAACAAAACTGGCATTCCCGCCTTTGAGCAATATGTACGGACACACGGGGAAACACGGGAC GGTTTAAAGACTGACGGTGCCAGTGCCGTTATTCCTAAGGAACTGATTACCCCCGTTTTCCAATTAAAGCAATCCAATTA CAACCTCGCCCAATATGCAACAGTCAAACAGGTTTCTAGTGGTTCGGGGACTTATCCAATTGCCACTAGTCAACAATCTG CGGTACTGGCTACTAAGGACGAACTAGCGGACATTGCCGATGTTGACGCGAACATGTTTACGGAAGTGCCGTTTGATGTG AAGACCCGGGCGGGCAAGATTGCTTTATCTAATGAAGTGGTGGAAGACGCCGAAGTTGATATTGTCAGCGAAGTTAAAAC GCAATTGCAACAACTGGTTGATAACACGGACAACACGCAGATTATGAGCTTGTTAACGGGAACCAGTTTCGCCAAAGCAA CGGCTGCCAATATTGATGATCTTAAAAAGATTTTCAATGTGACGTTAGATCCAGCTTTGAGCAAAATGTGGTTAGTGAAC CAGTCCGGGTTCAACTACCTTGATACCTTGAAAGATTCCGAGGGGCGTTACCTATTACAAACGAACCCAACGGCACCCAG TGGCTTCACCTTGTTAGGGGCACCAGTCGTCATGATTAGTGACAAGTTACTGGCCAACAACGCCGACGGGACGTTCCCAA TGATTGCAGGGGACTTATCACAAGCGGTGGCTGTTTTCCGGCGTAACCAAGTAACCGCCCAATGGGACAAGTTCGACCAG TTTAGCCAAGGGCTTTCCATCATTGTGCGGAATGATTATGAAGTGATTGATAAGACCGCTGTAATCAACGTGGCGTTAGG AACTGTGACTGCTGGTAAATAG Protein sequence : MKQDRRLTIDAELRAQMPQSETPEDGPAENSADPQSKGSQTSKGKTISGYAIVWNSPSKDLGGFTEVVTPKALDGVDLSN VLMLNNHDYTQVLASVKAGTLTLETDDKGLHFTAQLPNTSFANDVYEEVQSGNVDSCSFGFDSDDDTDEWTKDDGGNITR TINQVKSLFDVSVVAVPAYDDTNVQVDTRSYEKCINQEKEPDNMAKQTIIDPNNNDNGNGNKTGIPAFEQYVRTHGETRD GLKTDGASAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATSQQSAVLATKDELADIADVDANMFTEVPFDV KTRAGKIALSNEVVEDAEVDIVSEVKTQLQQLVDNTDNTQIMSLLTGTSFAKATAANIDDLKKIFNVTLDPALSKMWLVN QSGFNYLDTLKDSEGRYLLQTNPTAPSGFTLLGAPVVMISDKLLANNADGTFPMIAGDLSQAVAVFRRNQVTAQWDKFDQ FSQGLSIIVRNDYEVIDKTAVINVALGTVTAGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HMPREF0351_12127 | YP_006376733.1 | bifunctional family U35 bacteriophage prohead peptidase/major capsid protein | Not tested | Not named | Protein | 8e-124 | 54 |
