Gene Information

Name : JDM1_0041 (JDM1_0041)
Accession : YP_003061627.1
Strain : Lactobacillus plantarum JDM1
Genome accession: NC_012984
Putative virulence/resistance : Unknown
Product : transposase-like protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 46663 - 47661 bp
Length : 999 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCCGTACAACCATCTTACCTTAAAAGACCGAGAATGCATACTGTTGGGCGTCACTTTAAACGATACCTATCAAGT
TATTGCGGAGAAAATTGGGTGTTCCAAAGCCACCGTATCGCGCGAAATCAAGCGCAATGGTGGTCGTAAGGCATACTCGG
CCGTCAAAGCCCAAGAGAACTATCAGGGACGGCGGCTAAAAAGCCGACGTCCTAGGCTTCTAACTGATTTGAAGTTACGG
GATTTTGTTCTTCACTGTATTGTTCAACGTCAGTGGTCCCCGGAACAAATTTCCGGTCGTTTAGTCCACGAAAACAGTGA
ATGGCATGTCAGTTATAACACCATTTATCGTGGGATTGAACGTGATAATTTAGGCATCAAACGTAAGAATCACGAGGCTC
GTGGCTTTGCCCGTAAGCTCCGTCACCGTGGTAAAACCCGAAAGGTCAAGGGAACCATTAAGGAACGTCGGGGACGATTT
AACGACGTCCCTTCCGTTCATGAACGACCTGTTTCATGTGAGAATCGAAGCTGGTTTGGTCATTGGGAAAGTGATACCGT
TCGCGGTAAAACCGGGCGTTCGGCCCTGGTAACCTTGGTGGACCGCAAATCTCGGTATTTATTATCTCAGCGGGTTCCCA
AAGTAAACGCCAAGAACGTCACACAAGCGATGATTGACCTCTTGCATACCGTGACGCCCAAACGAGTTCGGACGCTTACG
CCGGATCGTGGAACTGAATTCGCAGGATACCGCGAAGTTAGTCAAGAGCTAAGTATCCCAGTCTATTTCCCAGATCCTCA
TGCGCCTCAGCAACGGGGAACCAATGAGAATACCAACGGACTTATCCGTGAGTATTTCCCCAAAGGAACCGACCTAGACC
AACTGACTGATCAAGATATCGACAAGTTTGTCAGGGATTTAAATCACCGACCACGTAAGGTCTTAGGCTGGAAGAGTCCA
TTTGAAGTTTTCTTCGGGACAAAGTTGCGCTTGATTTGA

Protein sequence :
MSPYNHLTLKDRECILLGVTLNDTYQVIAEKIGCSKATVSREIKRNGGRKAYSAVKAQENYQGRRLKSRRPRLLTDLKLR
DFVLHCIVQRQWSPEQISGRLVHENSEWHVSYNTIYRGIERDNLGIKRKNHEARGFARKLRHRGKTRKVKGTIKERRGRF
NDVPSVHERPVSCENRSWFGHWESDTVRGKTGRSALVTLVDRKSRYLLSQRVPKVNAKNVTQAMIDLLHTVTPKRVRTLT
PDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSP
FEVFFGTKLRLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02710 YP_005176177.1 ISApl1 transposase Not tested ICEPmu1 Protein 2e-56 47
unnamed CAC39292.1 - Not tested LPA Protein 2e-33 41