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Name : JDM1_0030 (JDM1_0030) Accession : YP_003061616.1 Strain : Lactobacillus plantarum JDM1 Genome accession: NC_012984 Putative virulence/resistance : Unknown Product : prophage Lp3 protein 1, integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 39443 - 40597 bp Length : 1155 bp Strand : - Note : - DNA sequence : ATGGCAACAATCAAGAAGTATCAGGACAAGGACGGGAATACCCGTTATCAGTTTCAAGTTTATTTAGGTGTTGATCCTCA AACTGGTAAAAAGAAGTCAACCCGGCGGCGGGGTTTTAAATCAAAAAGTGCTGCCCGTATTGCTTTATCCAGAATTGAAG TAGAGTTACAGCAAGAACCCGTTTTACCAGTTGATAATAATATTCTTTTCGTTAACGTTTATCACGAATGGTACGACCAG TATATTAATACCGTTCGTGAAAGCACTTGGGCACGGACTGCTGGCATGTTCGATAATCACATCTTGCCGTTGTTTGGTAA CAAGCGGTTGCGAACCATCACCGTCAACCAGTGCCAGCGTGCTGTTAATCTGTGGTTTAAAGAAGTCACGTACAATTACA AGCGTTGGTACAATTATCTGGTAGCAGTCTTTGAATACGGCTTAAAACACGGCTATATCACACATAATCCAGCTAGAATG ATTACAATGCCAGTTAAGCCTGATAGTTGGGGTGATAAGCCCGACAACTTCTGGGATCGCGATCAACTAAAGACGTTCTT CAAGTGCATTGACCAGCAAAAAGAGACCGAAAAGTATTGTCTCTTCCGGGTACTAGCGTTTGCAGGCGTACGACGCGGCG AGTGTTTAGCCCTGACATGGCAAGATATTGACTTTGTCCATAAGAACTTGCGGGTTAATAAAACACTCACCCAAGGGAAA CGCGGCAAGCAGATTATTCAAGCCCCTAAGACAAAAAAAGGCCGCCGCACTGTCAGCTTAGACAATACGACGGTAGAAAT ATTACAACGCTGGCATAAACAGCAACGTGAATATTATTTGTTTTTAGGTTTTAATACGTTACAACCGGATCAGTTAGTTT TTGCTAACACTAAGAACGGTTTTAAATCGCTTAATACTCCGGGTAAGTGGTTAAAGCGGATCATCACTGACTACCACCTA ACCCCTAGTATTACCGTACATGGCTTTCGACACAGTCACGCCTCCGCTTTGTTTGCCGCTGGTGCCACCATTAAAGAAGT ACAAACCCGATTAGGCCATGAGGACGTTGCAACAACCTTAAATGTTTACACACACGTCACTAAGGGCCAAAATCAACAGG CGGCCAACAAGTTAGCCAATTATTTAGGCTTTTAA Protein sequence : MATIKKYQDKDGNTRYQFQVYLGVDPQTGKKKSTRRRGFKSKSAARIALSRIEVELQQEPVLPVDNNILFVNVYHEWYDQ YINTVRESTWARTAGMFDNHILPLFGNKRLRTITVNQCQRAVNLWFKEVTYNYKRWYNYLVAVFEYGLKHGYITHNPARM ITMPVKPDSWGDKPDNFWDRDQLKTFFKCIDQQKETEKYCLFRVLAFAGVRRGECLALTWQDIDFVHKNLRVNKTLTQGK RGKQIIQAPKTKKGRRTVSLDNTTVEILQRWHKQQREYYLFLGFNTLQPDQLVFANTKNGFKSLNTPGKWLKRIITDYHL TPSITVHGFRHSHASALFAAGATIKEVQTRLGHEDVATTLNVYTHVTKGQNQQAANKLANYLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sip | AAP55251.1 | integrase protein | Not tested | SaPIbov2 | Protein | 7e-64 | 43 |
| SAPIG0469 | YP_005733279.1 | integrase | Not tested | SAPI-S0385 | Protein | 3e-62 | 43 |
| SAB0342c | YP_415844.1 | integrase | Not tested | SaPIbov | Protein | 3e-62 | 42 |
| unnamed | AAG29618.1 | integrase-like protein | Not tested | SaPIbov | Protein | 2e-62 | 42 |
| SAOV_0414c | YP_005735930.1 | integrase | Not tested | SaPI1 | Protein | 3e-62 | 42 |
